RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PA2G4Q9UQ80 394 aaKnown RBP10.84□□□□□ -0.67
CAPN3-208ENST00000397204 ATRNL1Q5VV63 1379 aa10.84□□□□□ -0.67
CAPN3-208ENST00000397204 GPR75-ASB3A0A0A6YYF3 556 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 LDHCP07864 332 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 ADORA1P30542 326 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 FLT3LGP49771 235 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 PSEN2P49810 448 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 LSM11P83369 360 aaKnown RBP eCLIP10.83□□□□□ -0.68
CAPN3-208ENST00000397204 RASGRF1Q13972 1273 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 MVPQ14764 893 aaKnown RBP10.83□□□□□ -0.68
CAPN3-208ENST00000397204 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 SMCR8Q8TEV9 937 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-208ENST00000397204 COA7Q96BR5 231 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 GABRQQ9UN88 632 aa10.83□□□□□ -0.68
CAPN3-208ENST00000397204 LAMA3Q16787 3333 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 A0A1B0GUL7 405 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 TRIM75PA6NK02 468 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 TNPO2O14787 897 aaKnown RBP10.82□□□□□ -0.68
CAPN3-208ENST00000397204 TFRCP02786 760 aaKnown RBP10.82□□□□□ -0.68
CAPN3-208ENST00000397204 GNAI3P08754 354 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 BTDP43251 543 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 RHBDL3P58872 404 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 GSTO1P78417 241 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 MECOMQ03112 1051 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 ARHGAP45Q92619 1136 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 TBC1D2Q9BYX2 928 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 UNC93B1Q9H1C4 597 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 DDX4Q9NQI0 724 aaKnown RBP10.82□□□□□ -0.68
CAPN3-208ENST00000397204 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
CAPN3-208ENST00000397204 AGTPBP1Q9UPW5 1226 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 PCDHGA10Q9Y5H3 936 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 MROH7-TTC4A0A0A0MT08 1334 aa10.82□□□□□ -0.68
CAPN3-208ENST00000397204 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-208ENST00000397204 FARP2O94887 1054 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-208ENST00000397204 GCLCP48506 637 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-208ENST00000397204 TFCP2Q12800 502 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 PICALMQ13492 652 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 MTX1Q13505 466 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 PROCA1Q8NCQ7 364 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-208ENST00000397204 NEUROD6Q96NK8 337 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 KCNK17Q96T54 332 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 MEIS3Q99687 375 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 OSBPL5Q9H0X9 879 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-208ENST00000397204 PRO3102Q9H379 93 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.81□□□□□ -0.68
CAPN3-208ENST00000397204 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
CAPN3-208ENST00000397204 ARIH1Q9Y4X5 557 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-208ENST00000397204 A0A1W2PPC1 479 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 SRGAP3O43295 1099 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 INHAP05111 366 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 ELNP15502 786 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 SPP2Q13103 211 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 PABPC4Q13310 644 aaKnown RBP eCLIP10.8□□□□□ -0.68
CAPN3-208ENST00000397204 FAM110CQ1W6H9 321 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 GORABQ5T7V8 394 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 KCNV2Q8TDN2 545 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 DDX12PQ92771 950 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 ZDHHC16Q969W1 377 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 NSUN4Q96CB9 384 aaKnown RBP10.8□□□□□ -0.68
CAPN3-208ENST00000397204 DEFB118Q96PH6 123 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 PAK6Q9NQU5 681 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-208ENST00000397204 HMG20BQ9P0W2 317 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 AK9Q5TCS8 1911 aa10.8□□□□□ -0.68
CAPN3-208ENST00000397204 RFX7Q2KHR2 1363 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 SLURP2P0DP57 97 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 CAP2P40123 477 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 RARSP54136 660 aaKnown RBP10.79□□□□□ -0.68
CAPN3-208ENST00000397204 TREML2Q5T2D2 321 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 ANKRD13CQ8N6S4 541 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 SPATA5Q8NB90 893 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 ZNF280CQ8ND82 737 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 ZNF384Q8TF68 577 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
CAPN3-208ENST00000397204 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
CAPN3-208ENST00000397204 SPDYE16A6NNV3 312 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-208ENST00000397204 USP17L5A8MUK1 530 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
CAPN3-208ENST00000397204 IGSF3O75054 1194 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 UQCRFS1P1P0C7P4 283 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN3-208ENST00000397204 SH3D19Q5HYK7 790 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 TBC1D9Q6ZT07 1266 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 NECAB2Q7Z6G3 386 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 CCDC84Q86UT8 332 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-208ENST00000397204 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-208ENST00000397204 ANKLE1Q8NAG6 615 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 WDR18Q9BV38 432 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 DHX36Q9H2U1 1008 aaKnown RBP10.78□□□□□ -0.68
CAPN3-208ENST00000397204 RAI14Q9P0K7 980 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 PI4KBQ9UBF8 816 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 GJD2Q9UKL4 321 aa10.78□□□□□ -0.68
CAPN3-208ENST00000397204 ZSWIM8A7E2V4 1837 aa10.77□□□□□ -0.68
CAPN3-208ENST00000397204 CUL9Q8IWT3 2517 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 COL6A3P12111 3177 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 BAG3O95817 575 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 GNAI2P04899 355 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms