RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 TOGARAM2Q6ZUX3 1019 aa18.16■□□□□ 0.5
ATP2A3-206ENST00000397043 DACH1Q9UI36 760 aa18.16■□□□□ 0.5
ATP2A3-206ENST00000397043 CEP131Q9UPN4 1083 aa18.16■□□□□ 0.5
ATP2A3-206ENST00000397043 VWA3AA6NCI4 1184 aa18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 ADAMTS2O95450 1211 aa18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 CASQ1P31415 396 aa18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 ALX1Q15699 326 aa18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 SPECC1LQ69YQ0 1117 aa18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 MYO5AQ9Y4I1 1855 aaKnown RBP18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 PES1O00541 588 aaKnown RBP18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 GNAT2P19087 354 aa18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 KCNQ4P56696 695 aa18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 UTP14CQ5TAP6 766 aaKnown RBP18.15■□□□□ 0.5
ATP2A3-206ENST00000397043 ARHGAP6O43182 974 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 PLEKHA8P1O95397 391 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 CLCN6P51797 869 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 DHX8Q14562 1220 aaKnown RBP18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 STAG1Q8WVM7 1258 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 CCDC34Q96HJ3 373 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 SPEF2Q9C093 1822 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 MTF1Q14872 753 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 EARS2Q5JPH6 523 aaKnown RBP18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 SMIM5Q71RC9 77 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 CATIPQ7Z7H3 387 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 ZNF34Q8IZ26 560 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 CCDC24Q8N4L8 307 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 IRX2Q9BZI1 471 aaPredicted RBP18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 TMTC2Q8N394 836 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 MLKLQ8NB16 471 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 WDR24Q96S15 920 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 BLZF1Q9H2G9 400 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 MAPK8IP1Q9UQF2 711 aa18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 MORC2Q9Y6X9 1032 aaPredicted RBP18.14■□□□□ 0.49
ATP2A3-206ENST00000397043 POLR3GO15318 223 aaPredicted RBP18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 CRKLP46109 303 aaKnown RBP18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 TMCO3Q6UWJ1 677 aa18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 PPFIBP1Q86W92 1011 aa18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 RASSF8Q8NHQ8 419 aa18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 L2HGDHQ9H9P8 463 aa18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 ARGLU1Q9NWB6 273 aaPredicted RBP18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 TEX33O43247 280 aa18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 SEC31AO94979 1220 aaKnown RBP18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 CCT6AP40227 531 aaKnown RBP18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 IQCA1Q86XH1 822 aa18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 ZNF446Q9NWS9 450 aa18.13■□□□□ 0.49
ATP2A3-206ENST00000397043 STK36Q9NRP7 1315 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 ERVV-1B6SEH8 477 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 NMT2O60551 498 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 FAM47AQ5JRC9 791 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 REXO1L1PQ8IX06 675 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 CCDC12Q8WUD4 166 aaPredicted RBP18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 SYMPKQ92797 1274 aaKnown RBP18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 KRT2P35908 639 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 CCDC87Q9NVE4 849 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 SRPRBQ9Y5M8 271 aaKnown RBP18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 MDM2Q00987 491 aaPredicted RBP18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 EVX2Q03828 476 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 TRIM65Q6PJ69 517 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 ENAHQ8N8S7 591 aaPredicted RBP18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 BRMS1Q9HCU9 246 aa18.12■□□□□ 0.49
ATP2A3-206ENST00000397043 PARP4Q9UKK3 1724 aaKnown RBP18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 SOWAHDA6NJG2 315 aa18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 CDC25AP30304 524 aa18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 GNL3LQ9NVN8 582 aaKnown RBP18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 FANCGO15287 622 aa18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 MCM7P33993 719 aa18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 BMS1Q14692 1282 aaKnown RBP18.11■□□□□ 0.49
ATP2A3-206ENST00000397043 A0A087X0B3 334 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 USP17L12C9JPN9 530 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 USP17L21D6R901 530 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 WNT7AO00755 349 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 IGSF22Q8N9C0 903 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 TC2NQ8N9U0 490 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 ATRNO75882 1429 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 CAVIN4Q5BKX8 364 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 PIK3AP1Q6ZUJ8 805 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 ACTN4O43707 911 aaKnown RBP18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 NLRP5P59047 1200 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 MORC3Q14149 939 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 KANK3Q6NY19 840 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 ENOX1Q8TC92 643 aaKnown RBP18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 KCND1Q9NSA2 647 aa18.1■□□□□ 0.49
ATP2A3-206ENST00000397043 AATFQ9NY61 560 aaKnown RBP eCLIP18.1■□□□□ 0.493e-6■■■■■ 29.5
ATP2A3-206ENST00000397043 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 PHLPP2Q6ZVD8 1323 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 SYNRGQ9UMZ2 1314 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 ANKRD18AQ8IVF6 992 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 TFCP2L1Q9NZI6 479 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 CTNND2Q9UQB3 1225 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 PARP3Q9Y6F1 533 aa18.09■□□□□ 0.49
ATP2A3-206ENST00000397043 FAM237AA0A1B0GTK4 181 aa18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 AKR1B15C9JRZ8 316 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms