RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SCRN1Q12765 414 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 C9orf131Q5VYM1 1079 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 SYNE3Q6ZMZ3 975 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 CCDC83Q8IWF9 413 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 STK11IPQ8N1F8 1099 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 ENAHQ8N8S7 591 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-209ENST00000397036 NECAB1Q8N987 351 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 PLIN4Q96Q06 1357 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 DDTLA6NHG4 134 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-209ENST00000397036 CCDC69A6NI79 296 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 TBC1D12O60347 775 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 CACNB3P54284 484 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 MAP3K10Q02779 954 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 TNFAIP1Q13829 316 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 GPR162Q16538 588 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 TATDN1Q6P1N9 297 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 SMARCC2Q8TAQ2 1214 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 HERC5Q9UII4 1024 aaKnown RBP15.94■□□□□ 0.14
MCF2L-209ENST00000397036 SMC3Q9UQE7 1217 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 MYH1P12882 1939 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 ZBTB43O43298 467 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 TSPY3P0CV98 308 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 TSPY8P0CW00 308 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 SHMT1P34896 483 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 TNNI2P48788 182 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 TCP10Q12799 353 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 NBPF9Q3BBW0 867 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 FAM47AQ5JRC9 791 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 NFXL1Q6ZNB6 911 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 SLC44A5Q8NCS7 719 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 RGS22Q8NE09 1264 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 MAP3K14Q99558 947 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 PGAP2Q9UHJ9 254 aa15.94■□□□□ 0.14
MCF2L-209ENST00000397036 CNTNAP1P78357 1384 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 ECM29Q5VYK3 1845 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 SHTN1A0MZ66 631 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 CLRN2A0PK11 232 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 CALM1P0DP23 149 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 CALM2P0DP24 149 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 CALM3P0DP25 149 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 HMGN5P82970 282 aaKnown RBP15.93■□□□□ 0.14
MCF2L-209ENST00000397036 IFIT1BQ5T764 474 aaKnown RBP15.93■□□□□ 0.14
MCF2L-209ENST00000397036 RCSD1Q6JBY9 416 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 ZSCAN29Q8IWY8 852 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-209ENST00000397036 SENP2Q9HC62 589 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 IL17RBQ9NRM6 502 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
MCF2L-209ENST00000397036 ADAMTSL1Q8N6G6 1762 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 IGKV6D-41A0A0C4DH26 115 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 CCDC196A0A1B0GTZ2 297 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 GOLGA8BA8MQT2 603 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 TCP10L2B9ZVM9 353 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 DDAH1O94760 285 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 PDCP20941 246 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 KIF4BQ2VIQ3 1234 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 DPY19L2Q6NUT2 758 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 CATIPQ7Z7H3 387 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 NSUN7Q8NE18 718 aaKnown RBP15.92■□□□□ 0.14
MCF2L-209ENST00000397036 L3MBTL3Q96JM7 780 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-209ENST00000397036 ZKSCAN3Q9BRR0 538 aa15.92■□□□□ 0.14
MCF2L-209ENST00000397036 METAP2P50579 478 aaKnown RBP eCLIP15.91■□□□□ 0.14
MCF2L-209ENST00000397036 TROAPQ12815 778 aa15.91■□□□□ 0.14
MCF2L-209ENST00000397036 STK3Q13188 491 aa15.91■□□□□ 0.14
MCF2L-209ENST00000397036 SLC4A8Q2Y0W8 1093 aa15.91■□□□□ 0.14
MCF2L-209ENST00000397036 CPLX2Q6PUV4 134 aaKnown RBP15.91■□□□□ 0.14
MCF2L-209ENST00000397036 SAMD7Q7Z3H4 446 aa15.91■□□□□ 0.14
MCF2L-209ENST00000397036 ZNF654Q8IZM8 581 aa15.91■□□□□ 0.14
MCF2L-209ENST00000397036 CRACR2BQ8N4Y2 399 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-209ENST00000397036 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.91■□□□□ 0.14
MCF2L-209ENST00000397036 DNAJC18Q9H819 358 aa15.91■□□□□ 0.14
MCF2L-209ENST00000397036 CDKL5O76039 1030 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 CTDNEP1O95476 244 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 EGFRP00533 1210 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 GJB2P29033 226 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 CCT2P78371 535 aaKnown RBP15.9■□□□□ 0.14
MCF2L-209ENST00000397036 RAB3GAP1Q15042 981 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 FANCBQ8NB91 859 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 CSRNP1Q96S65 589 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 VEZTQ9HBM0 779 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 ADARB2Q9NS39 739 aaKnown RBP15.9■□□□□ 0.14
MCF2L-209ENST00000397036 FAM217BQ9NTX9 383 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-209ENST00000397036 KIF3AQ9Y496 699 aa15.9■□□□□ 0.14
MCF2L-209ENST00000397036 DDNO94850 711 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 CERKLQ49MI3 558 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 TBC1D10BQ4KMP7 808 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 RBM26Q5T8P6 1007 aaKnown RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 APOBEC3FQ8IUX4 373 aaKnown RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 TRIM34Q9BYJ4 488 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 MTMR4Q9NYA4 1195 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 CPLX1O14810 134 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 NMT2O60551 498 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 TOP1P11387 765 aaKnown RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 AKR1B1P15121 316 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 IFNAR1P17181 557 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 LMOD1P29536 600 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms