RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CHD4Q14839 1912 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 ZSCAN12O43309 604 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 LIFRP42702 1097 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 SMC1AQ14683 1233 aaKnown RBP15.93■□□□□ 0.14
NUP98-204ENST00000397004 ZNF512BQ96KM6 892 aaPredicted RBP15.93■□□□□ 0.14
NUP98-204ENST00000397004 PCDH11XQ9BZA7 1347 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 PCDH11YQ9BZA8 1340 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 hCG_1642624A0A1W2PR95 340 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 PDE8BO95263 885 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 STX17P56962 302 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 TAF7LQ5H9L4 462 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 ELOA2Q8IYF1 753 aaPredicted RBP15.93■□□□□ 0.14
NUP98-204ENST00000397004 RAI14Q9P0K7 980 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 ADGRG1Q9Y653 693 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 IFIT3O14879 490 aaKnown RBP15.93■□□□□ 0.14
NUP98-204ENST00000397004 CUL4BQ13620 913 aa15.93■□□□□ 0.14
NUP98-204ENST00000397004 GPR161Q8N6U8 529 aaKnown RBP15.93■□□□□ 0.14
NUP98-204ENST00000397004 CDKL5O76039 1030 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 MBD4O95243 580 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 ARID4AP29374 1257 aaPredicted RBP15.92■□□□□ 0.14
NUP98-204ENST00000397004 STK36Q9NRP7 1315 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 CDC25AP30304 524 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 SSRP1Q08945 709 aaKnown RBP15.92■□□□□ 0.14
NUP98-204ENST00000397004 RASGRF1Q13972 1273 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 CPLX3Q8WVH0 158 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 SLC12A7Q9Y666 1083 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 COL4A1P02462 1669 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 CCP110O43303 1012 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 FGFR2P21802 821 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 FXR1P51114 621 aaKnown RBP eCLIP15.92■□□□□ 0.14
NUP98-204ENST00000397004 WWC2Q6AWC2 1192 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 LCORLQ8N3X6 602 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.92■□□□□ 0.145e-7■■■□□ 17.8
NUP98-204ENST00000397004 STRN4Q9NRL3 753 aa15.92■□□□□ 0.14
NUP98-204ENST00000397004 CTSWP56202 376 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 CRACR2BQ8N4Y2 399 aaPredicted RBP15.91■□□□□ 0.14
NUP98-204ENST00000397004 MAGEB6Q8N7X4 407 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 SRPRBQ9Y5M8 271 aaKnown RBP15.91■□□□□ 0.14
NUP98-204ENST00000397004 WTIPA6NIX2 430 aaPredicted RBP15.91■□□□□ 0.14
NUP98-204ENST00000397004 MAP2K7O14733 419 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 N4BP1O75113 896 aaKnown RBP15.91■□□□□ 0.14
NUP98-204ENST00000397004 ADGRA1Q86SQ6 560 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 CABP5Q9NP86 173 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 NID2Q14112 1375 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 PATL2C9JE40 543 aaKnown RBP15.91■□□□□ 0.14
NUP98-204ENST00000397004 EVX2Q03828 476 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 MLKLQ8NB16 471 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 STAMQ92783 540 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 ADD3Q9UEY8 706 aaKnown RBP15.91■□□□□ 0.14
NUP98-204ENST00000397004 PUF60Q9UHX1 559 aaKnown RBP15.91■□□□□ 0.14
NUP98-204ENST00000397004 LCMT1Q9UIC8 334 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
NUP98-204ENST00000397004 NRDCO43847 1150 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 DHX8Q14562 1220 aaKnown RBP15.9■□□□□ 0.14
NUP98-204ENST00000397004 ALX1Q15699 326 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 PKN1Q16512 942 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 LONRF2Q1L5Z9 754 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 MTRQ99707 1265 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 ROBO1Q9Y6N7 1651 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 COL22A1Q8NFW1 1626 aaPredicted RBP15.9■□□□□ 0.14
NUP98-204ENST00000397004 MAP3K15Q6ZN16 1313 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 GYPCP04921 128 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 AFMP43652 599 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 TOM1L2Q6ZVM7 507 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 SH3RF1Q7Z6J0 888 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 CCDC12Q8WUD4 166 aaPredicted RBP15.9■□□□□ 0.14
NUP98-204ENST00000397004 PIGBQ92521 554 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 PPP1R3GB7ZBB8 358 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 MYO1BO43795 1136 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 PRDM1O75626 825 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
NUP98-204ENST00000397004 PLCD1P51178 756 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 RRP12Q5JTH9 1297 aaKnown RBP15.9■□□□□ 0.14
NUP98-204ENST00000397004 CDKAL1Q5VV42 579 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
NUP98-204ENST00000397004 RABGGTAQ92696 567 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 AIDAQ96BJ3 306 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 CNNM1Q9NRU3 951 aa15.9■□□□□ 0.14
NUP98-204ENST00000397004 CCDC66A2RUB6 948 aa15.89■□□□□ 0.14
NUP98-204ENST00000397004 NPY5RQ15761 445 aa15.89■□□□□ 0.14
NUP98-204ENST00000397004 AKNAD1Q5T1N1 836 aa15.89■□□□□ 0.14
NUP98-204ENST00000397004 KLHL10Q6JEL2 608 aa15.89■□□□□ 0.14
NUP98-204ENST00000397004 DOCK2Q92608 1830 aa15.89■□□□□ 0.13
NUP98-204ENST00000397004 RAD51AP2Q09MP3 1159 aa15.89■□□□□ 0.13
NUP98-204ENST00000397004 TRIM29Q14134 588 aa15.89■□□□□ 0.13
NUP98-204ENST00000397004 BEND6Q5SZJ8 279 aaPredicted RBP15.89■□□□□ 0.13
NUP98-204ENST00000397004 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
NUP98-204ENST00000397004 CDC5LQ99459 802 aaKnown RBP15.89■□□□□ 0.13
NUP98-204ENST00000397004 FOXP1Q9H334 677 aaPredicted RBP15.89■□□□□ 0.13
NUP98-204ENST00000397004 ARGLU1Q9NWB6 273 aaPredicted RBP15.89■□□□□ 0.13
NUP98-204ENST00000397004 BCL9LQ86UU0 1499 aa15.89■□□□□ 0.13
NUP98-204ENST00000397004 AHDC1Q5TGY3 1603 aaPredicted RBP15.89■□□□□ 0.13
NUP98-204ENST00000397004 VEGFAP15692 232 aaPredicted RBP15.89■□□□□ 0.13
NUP98-204ENST00000397004 TXLNAP40222 546 aa15.89■□□□□ 0.13
NUP98-204ENST00000397004 ERVK-24P63145 666 aa15.89■□□□□ 0.13
NUP98-204ENST00000397004 CASP14P31944 242 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 FAM193AP78312 1265 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 FUT2Q10981 343 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms