RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TAOK2Q9UL54 1235 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 SHTN1A0MZ66 631 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 DDTLA6NHG4 134 aaPredicted RBP14.9□□□□□ -0.02
TRIM39-204ENST00000396548 ZBTB43O43298 467 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 RBM5P52756 815 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRIM39-204ENST00000396548 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 PGAP2Q9UHJ9 254 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 HDAC9Q9UKV0 1011 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 IGKV6D-41A0A0C4DH26 115 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 SHMT1P34896 483 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 IQCA1Q86XH1 822 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 RAB11FIP4Q86YS3 637 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 CHMP4CQ96CF2 233 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 MYL10Q9BUA6 226 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 ZNF541Q9H0D2 1346 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 SRCAPQ6ZRS2 3230 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 CCDC69A6NI79 296 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 ADD1P35611 737 aaKnown RBP14.89□□□□□ -0.03
TRIM39-204ENST00000396548 METAP2P50579 478 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRIM39-204ENST00000396548 TROAPQ12815 778 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 DGKHQ86XP1 1220 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 ZNF654Q8IZM8 581 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 NEDD1Q8NHV4 660 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 DHX36Q9H2U1 1008 aaKnown RBP14.89□□□□□ -0.03
TRIM39-204ENST00000396548 ZNF70Q9UC06 446 aaPredicted RBP14.89□□□□□ -0.03
TRIM39-204ENST00000396548 WDR33Q9C0J8 1336 aaKnown RBP14.89□□□□□ -0.03
TRIM39-204ENST00000396548 ERICH2A1L162 156 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 ZSCAN22P10073 491 aaPredicted RBP14.89□□□□□ -0.03
TRIM39-204ENST00000396548 YBX3P16989 372 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRIM39-204ENST00000396548 DPF2Q92785 391 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 MKNK2Q9HBH9 465 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 SWAP70Q9UH65 585 aa14.89□□□□□ -0.03
TRIM39-204ENST00000396548 TSPY2A6NKD2 308 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 PDIA4P13667 645 aaKnown RBP14.88□□□□□ -0.03
TRIM39-204ENST00000396548 RXRAP19793 462 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 HMGN5P82970 282 aaKnown RBP14.88□□□□□ -0.03
TRIM39-204ENST00000396548 FKBP1CQ5VVH2 108 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 NFXL1Q6ZNB6 911 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 NBPF11Q86T75 865 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 SERPINB13Q9UIV8 391 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 DHX16O60231 1041 aaKnown RBP14.88□□□□□ -0.03
TRIM39-204ENST00000396548 MCM4P33991 863 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 DLGAP5Q15398 846 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 IFIT1BQ5T764 474 aaKnown RBP14.88□□□□□ -0.03
TRIM39-204ENST00000396548 OGFOD1Q8N543 542 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 RGS22Q8NE09 1264 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 MYOZ2Q9NPC6 264 aa14.88□□□□□ -0.03
TRIM39-204ENST00000396548 BAG4O95429 457 aaKnown RBP14.87□□□□□ -0.03
TRIM39-204ENST00000396548 LMNB1P20700 586 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 MICU3Q86XE3 530 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 FUT2Q10981 343 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 LARP1BQ659C4 914 aaKnown RBP14.87□□□□□ -0.03
TRIM39-204ENST00000396548 TATDN1Q6P1N9 297 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
TRIM39-204ENST00000396548 FANCBQ8NB91 859 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 GOLGA8AA7E2F4 631 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 WNT10BO00744 389 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 DDAH1O94760 285 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 CCDC178Q5BJE1 867 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 DDX11Q96FC9 970 aa14.87□□□□□ -0.03
TRIM39-204ENST00000396548 EGFRP00533 1210 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 TSPY3P0CV98 308 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 TSPY8P0CW00 308 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 SLURP2P0DP57 97 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 PDCP20941 246 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 TCP10Q12799 353 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 MAP3K14Q99558 947 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 PI4KBQ9UBF8 816 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 NAP1L2Q9ULW6 460 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-204ENST00000396548 F13A1P00488 732 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 IFNAR1P17181 557 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 GMPSP49915 693 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-204ENST00000396548 PPP2R5BQ15173 497 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 ARHGAP27Q6ZUM4 889 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 CDC37L1Q7L3B6 337 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 STK36Q9NRP7 1315 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 MYH6P13533 1939 aa14.86□□□□□ -0.03
TRIM39-204ENST00000396548 EIF6P56537 245 aaKnown RBP14.85□□□□□ -0.03
TRIM39-204ENST00000396548 NBPF9Q3BBW0 867 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 CCDC144CPQ8IYA2 1237 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 FAM151AQ8WW52 585 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 HLA-DOAP06340 250 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 TCHHQ07283 1943 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 MYH4Q9Y623 1939 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 AKR1B1P15121 316 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 FAM83AQ86UY5 434 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 FOXP4Q8IVH2 680 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-204ENST00000396548 CHAMP1Q96JM3 812 aa14.85□□□□□ -0.03
TRIM39-204ENST00000396548 FMNL1O95466 1100 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-204ENST00000396548 CALM1P0DP23 149 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 CALM2P0DP24 149 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 CALM3P0DP25 149 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 RTN1Q16799 776 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 CATIPQ7Z7H3 387 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 CLRN2A0PK11 232 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 SYNE3Q6ZMZ3 975 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 CRACR2BQ8N4Y2 399 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-204ENST00000396548 CEP95Q96GE4 821 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms