RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ERLIN1O75477 346 aa11.21□□□□□ -0.62
TRIM39-203ENST00000396547 EIF3JO75822 258 aaKnown RBP11.21□□□□□ -0.62
TRIM39-203ENST00000396547 CCT6AP40227 531 aaKnown RBP11.21□□□□□ -0.62
TRIM39-203ENST00000396547 ANTXR2P58335 489 aa11.21□□□□□ -0.62
TRIM39-203ENST00000396547 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.62
TRIM39-203ENST00000396547 AGXT2Q9BYV1 514 aa11.21□□□□□ -0.62
TRIM39-203ENST00000396547 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.62
TRIM39-203ENST00000396547 STRN4Q9NRL3 753 aa11.21□□□□□ -0.62
TRIM39-203ENST00000396547 UTYO14607 1347 aa11.21□□□□□ -0.62
TRIM39-203ENST00000396547 BTBD18B2RXH4 712 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 B4E1Z4 1266 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 PLSCR1O15162 318 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 BRD3Q15059 726 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 BEND6Q5SZJ8 279 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 SLC9C2Q5TAH2 1124 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 NCAPH2Q6IBW4 605 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 USP49Q70CQ1 688 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 GPATCH11Q8N954 259 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 UBR2Q8IWV8 1755 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 IARSP41252 1262 aaKnown RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 SART3Q15020 963 aaKnown RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 POSTNQ15063 836 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 E2F4Q16254 413 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 CPLX2Q6PUV4 134 aaKnown RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 CDC25AP30304 524 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 DDB1Q16531 1140 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 TTC31Q49AM3 519 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 TEX13AQ9BXU3 409 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-203ENST00000396547 CEP126Q9P2H0 1117 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 CDC23Q9UJX2 597 aa11.2□□□□□ -0.62
TRIM39-203ENST00000396547 CTAGE9A4FU28 777 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 EIF3CLB5ME19 914 aaKnown RBP11.19□□□□□ -0.62
TRIM39-203ENST00000396547 ENC1O14682 589 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
TRIM39-203ENST00000396547 CASP14P31944 242 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 ZAP70P43403 619 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 SCARF1Q14162 830 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 CASP8Q14790 479 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 FKBP15Q5T1M5 1219 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 TEX2Q8IWB9 1127 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 NOA1Q8NC60 698 aaKnown RBP11.19□□□□□ -0.62
TRIM39-203ENST00000396547 CAPZA3Q96KX2 299 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 EIF3CQ99613 913 aaKnown RBP11.19□□□□□ -0.62
TRIM39-203ENST00000396547 ZKSCAN3Q9BRR0 538 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 FAM204AQ9H8W3 233 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 CTAGE15A4D2H0 777 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 CTAGE8P0CG41 777 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 CTAGE6Q86UF2 777 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 CTAGE4Q8IX94 777 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
TRIM39-203ENST00000396547 GUCA1BQ9UMX6 200 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 TFR2Q9UP52 801 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 ADGRG1Q9Y653 693 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 COL5A3P25940 1745 aaPredicted RBP11.19□□□□□ -0.62
TRIM39-203ENST00000396547 PALLDQ8WX93 1383 aa11.19□□□□□ -0.62
TRIM39-203ENST00000396547 GOLGA8AA7E2F4 631 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 IDH1O75874 414 aaKnown RBP11.18□□□□□ -0.62
TRIM39-203ENST00000396547 PTPAQ15257 358 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 RESP18Q5W5W9 173 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 CYB5R4Q7L1T6 521 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 PACS2Q86VP3 889 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 CEP112Q8N8E3 955 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
TRIM39-203ENST00000396547 SLF1Q9BQI6 1058 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 HPSEQ9Y251 543 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 IVLP07476 585 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 PPARDQ03181 441 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 TBX2Q13207 712 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-203ENST00000396547 MB21D2Q8IYB1 491 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-203ENST00000396547 MICALL1Q8N3F8 863 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 RAPGEF4Q8WZA2 1011 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 EXOC5O00471 708 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 MAP2K7O14733 419 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 GPAA1O43292 621 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 NOP2P46087 812 aaKnown RBP11.18□□□□□ -0.62
TRIM39-203ENST00000396547 GSPT2Q8IYD1 628 aaKnown RBP11.18□□□□□ -0.62
TRIM39-203ENST00000396547 CAMKK2Q96RR4 588 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 VPS16Q9H269 839 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 MAPK8IP1Q9UQF2 711 aa11.18□□□□□ -0.62
TRIM39-203ENST00000396547 hCG_1642624A0A1W2PR95 340 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 LRRIQ3A6PVS8 624 aaPredicted RBP11.17□□□□□ -0.62
TRIM39-203ENST00000396547 ZBTB43O43298 467 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 NR5A1Q13285 461 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 TTC19Q6DKK2 380 aaPredicted RBP11.17□□□□□ -0.62
TRIM39-203ENST00000396547 TTLL7Q6ZT98 887 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 NUP133Q8WUM0 1156 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 TRIM10Q9UDY6 481 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 L1RE1Q9UN81 338 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 PCDH11XQ9BZA7 1347 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 PCDH11YQ9BZA8 1340 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 SRGAP2O75044 1071 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 GUCY1A2P33402 732 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms