RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 CEP128Q6ZU80 1094 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 SYCP3Q8IZU3 236 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 PPP1R13BQ96KQ4 1090 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 CAPS2Q9BXY5 557 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 PA2G4Q9UQ80 394 aaKnown RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 BTBD11A6QL63 1104 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 SNUPNO95149 360 aaKnown RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 LARGE1O95461 756 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 CCDC175P0C221 793 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 CWF19L2Q2TBE0 894 aaKnown RBP9.5□□□□□ -0.89
NDE1-202ENST00000396355 LONRF3Q496Y0 759 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 STK38LQ9Y2H1 464 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 ADAMTS7Q9UKP4 1686 aa9.5□□□□□ -0.89
NDE1-202ENST00000396355 HEG1Q9ULI3 1381 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 CTAGE5O15320 804 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 THEMIS2Q5TEJ8 643 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 KLHL10Q6JEL2 608 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 FSIP1Q8NA03 581 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 CTNNBL1Q8WYA6 563 aaPredicted RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 RIN2Q8WYP3 895 aaPredicted RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 KAZALD1Q96I82 304 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 SCAND2PQ9GZW5 306 aaPredicted RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 LRRC4BQ9NT99 713 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 TRPM3Q9HCF6 1732 aaPredicted RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 COL5A2P05997 1499 aaPredicted RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 SLIT3O75094 1523 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 E7EVH7 732 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 RAB11FIP3O75154 756 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 IMMTQ16891 758 aaKnown RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 ABCB6Q9NP58 842 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 HOXB7P09629 217 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 MYBL2P10244 700 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 LAMB3Q13751 1172 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 TRIM29Q14134 588 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 ZRSR2Q15696 482 aaKnown RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 SYNE3Q6ZMZ3 975 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 CCAR1Q8IX12 1150 aaKnown RBP9.49□□□□□ -0.89
NDE1-202ENST00000396355 MTRQ99707 1265 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 PRDM16Q9HAZ2 1276 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 PARP3Q9Y6F1 533 aa9.49□□□□□ -0.89
NDE1-202ENST00000396355 USP42Q9H9J4 1324 aaKnown RBP9.48□□□□□ -0.89
NDE1-202ENST00000396355 COL14A1Q05707 1796 aaKnown RBP9.48□□□□□ -0.89
NDE1-202ENST00000396355 ABCD1P33897 745 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 TXLNAP40222 546 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 AK2P54819 239 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 KCNB1Q14721 858 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 CCDC40Q4G0X9 1142 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 AKAP4Q5JQC9 854 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 RUFY3Q7L099 469 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
NDE1-202ENST00000396355 MAP3K2Q9Y2U5 619 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
NDE1-202ENST00000396355 ELP1O95163 1332 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 PTH1RQ03431 593 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 ADCK5Q3MIX3 580 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 HIBCHQ6NVY1 386 aaPredicted RBP9.48□□□□□ -0.89
NDE1-202ENST00000396355 SMIM5Q71RC9 77 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 COL23A1Q86Y22 540 aaPredicted RBP9.48□□□□□ -0.89
NDE1-202ENST00000396355 JADE2Q9NQC1 790 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 RHBDL2Q9NX52 303 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 GOLGA6BA6NDN3 693 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 RNMTO43148 476 aaKnown RBP9.48□□□□□ -0.89
NDE1-202ENST00000396355 MTX1Q13505 466 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 HLTFQ14527 1009 aaKnown RBP eCLIP9.48□□□□□ -0.89
NDE1-202ENST00000396355 SLFNL1Q499Z3 407 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 TRAPPC3LQ5T215 181 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 SLC30A9Q6PML9 568 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 SMARCC2Q8TAQ2 1214 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 WDR66Q8TBY9 1149 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 CYP46A1Q9Y6A2 500 aa9.48□□□□□ -0.89
NDE1-202ENST00000396355 AP5Z1O43299 807 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 HSF2BPO75031 334 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 ST3GAL1Q11201 340 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 B4GALNT2Q8NHY0 566 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
NDE1-202ENST00000396355 KLC4Q9NSK0 619 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 SWAP70Q9UH65 585 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 LIMCH1Q9UPQ0 1083 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 H3BQF6 201 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 PDE1CQ14123 709 aaPredicted RBP9.47□□□□□ -0.89
NDE1-202ENST00000396355 CASP8Q14790 479 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 AMOTQ4VCS5 1084 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 FAM71BQ8TC56 605 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 XPO4Q9C0E2 1151 aaKnown RBP9.47□□□□□ -0.89
NDE1-202ENST00000396355 COL22A1Q8NFW1 1626 aaPredicted RBP9.47□□□□□ -0.89
NDE1-202ENST00000396355 CBFA2T2O43439 604 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 CABP4P57796 275 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 MECOMQ03112 1051 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 RASIP1Q5U651 963 aa9.47□□□□□ -0.89
NDE1-202ENST00000396355 LRRD1A4D1F6 860 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 PYGLP06737 847 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 PDHA1P08559 390 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms