RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 RESP18Q5W5W9 173 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 AK7Q96M32 723 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 CARD6Q9BX69 1037 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 IFIT3O14879 490 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 ATP2B1P20020 1258 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 MAP3K14Q99558 947 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 WWC3Q9ULE0 1092 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.16
CCHCR1-203ENST00000396268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 PDE8BO95263 885 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 TTF1Q15361 905 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 CCDC93Q567U6 631 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 RRP12Q5JTH9 1297 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 VSTM4Q8IW00 320 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 ZSWIM4Q9H7M6 989 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 CUTAO60888 179 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 PDE6AP16499 860 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 PHKA1P46020 1223 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 TMCO3Q6UWJ1 677 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 SETDB2Q96T68 719 aa16.07■□□□□ 0.16
CCHCR1-203ENST00000396268 RFC4P35249 363 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 TRAPPC3LQ5T215 181 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 BTBD18B2RXH4 712 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 TUBB4AP04350 444 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 H2AFXP16104 143 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 CYP2C19P33261 490 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 PDE4BQ07343 736 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 CCDC152Q4G0S7 254 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 IGDCC4Q8TDY8 1250 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 NAPBQ9H115 298 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 KCNJ14Q9UNX9 436 aa16.06■□□□□ 0.16
CCHCR1-203ENST00000396268 SAFBQ15424 915 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 NTRK3Q16288 839 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 CELF1Q92879 486 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 FAM53CQ9NYF3 392 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 PHLPP2Q6ZVD8 1323 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 ZSCAN12O43309 604 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 CMTR1Q8N1G2 835 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 FAM217BQ9NTX9 383 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 ZSWIM5Q9P217 1185 aa16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-203ENST00000396268 POLR2DO15514 142 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 BMP6P22004 513 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 GUCY1A2P33402 732 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 GRIN1Q05586 938 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 TEX35Q5T0J7 233 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 NOSTRINQ8IVI9 506 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 SMARCE1Q969G3 411 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 ARGLU1Q9NWB6 273 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 C4AP0C0L4 1744 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 ADKP55263 362 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 NFIXQ14938 502 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 DIS3L2Q8IYB7 885 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 NFE2L3Q9Y4A8 694 aa16.04■□□□□ 0.16
CCHCR1-203ENST00000396268 GNG11P61952 73 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 RAD51AP2Q09MP3 1159 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 REXO1L1PQ8IX06 675 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 RGS17Q9UGC6 210 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 IQSEC3Q9UPP2 1182 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 PPP2R2CQ9Y2T4 447 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 FANCGO15287 622 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 ARHGAP6O43182 974 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 MBD4O95243 580 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 CHRNDQ07001 517 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 POSTNQ15063 836 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 INTS13Q9NVM9 706 aa16.03■□□□□ 0.16
CCHCR1-203ENST00000396268 FGFR2P21802 821 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 C10orf67Q8IYJ2 551 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 TRIM22Q8IYM9 498 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 IFNL3Q8IZI9 196 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 MAN1B1Q9UKM7 699 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 CASZ1Q86V15 1759 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 TRIM66O15016 1216 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 IGHMBP2P38935 993 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms