RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 OTOP1Q7RTM1 612 aa7.96□□□□□ -1.13
LMO3-205ENST00000396205 TRMT44Q8IYL2 757 aaKnown RBP7.96□□□□□ -1.13
LMO3-205ENST00000396205 PXYLP1Q8TE99 480 aa7.96□□□□□ -1.13
LMO3-205ENST00000396205 ANTXR1Q9H6X2 564 aa7.96□□□□□ -1.13
LMO3-205ENST00000396205 ZBTB21Q9ULJ3 1066 aa7.96□□□□□ -1.13
LMO3-205ENST00000396205 IGHA2P01877 340 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 BACE1P56817 501 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 ALX1Q15699 326 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 SLC9C2Q5TAH2 1124 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 ANAPC4Q9UJX5 808 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 APBB1O00213 710 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 SHMT1P34896 483 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 USP17L2Q6R6M4 530 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 HPS5Q9UPZ3 1129 aa7.96□□□□□ -1.14
LMO3-205ENST00000396205 PDHXO00330 501 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 NUCB1Q02818 461 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 TCP10Q12799 353 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 DGKZQ13574 1117 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 TAF1CQ15572 869 aaPredicted RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 C12orf60Q5U649 245 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 LPAR1Q92633 364 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 IL1RAPL2Q9NP60 686 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 SCAF8Q9UPN6 1271 aaKnown RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 COL11A1P12107 1806 aaPredicted RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 RNF113AO15541 343 aaKnown RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 IDH1O75874 414 aaKnown RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 TBC1D8O95759 1140 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 MX1P20591 662 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 ZMYM1Q5SVZ6 1142 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 TMEM179Q6ZVK1 233 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 RWDD1Q9H446 243 aaPredicted RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 HELLSQ9NRZ9 838 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 IGKV6D-41A0A0C4DH26 115 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 GOLIM4O00461 696 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 HOXD10P28358 340 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 RRP1BQ14684 758 aaKnown RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 EVI5LQ96CN4 794 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 STRBPQ96SI9 672 aaKnown RBP7.95□□□□□ -1.14
LMO3-205ENST00000396205 SH2D4AQ9H788 454 aa7.95□□□□□ -1.14
LMO3-205ENST00000396205 OSBPP22059 807 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 CNKSR2Q8WXI2 1034 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 KIF22Q14807 665 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 MIGA2Q7L4E1 593 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 LCORLQ8N3X6 602 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 SHCBP1Q8NEM2 672 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 ZNF333Q96JL9 665 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 CRBNQ96SW2 442 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 R3HDMLQ9H3Y0 253 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 ZNF287Q9HBT7 754 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 ADAMTS5Q9UNA0 930 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 FZD1Q9UP38 647 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 ZHX2Q9Y6X8 837 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 USP17L10C9JJH3 530 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 PLA2G6O60733 806 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 GUCY1A2P33402 732 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 COPB2P35606 906 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 DYNLL1P63167 89 aaKnown RBP7.94□□□□□ -1.14
LMO3-205ENST00000396205 PICALMQ13492 652 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 MB21D1Q8N884 522 aa7.94□□□□□ -1.14
LMO3-205ENST00000396205 PLXNA1Q9UIW2 1896 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 EIF5BO60841 1220 aaKnown RBP7.93□□□□□ -1.14
LMO3-205ENST00000396205 XRCC5P13010 732 aaKnown RBP7.93□□□□□ -1.14
LMO3-205ENST00000396205 USP5P45974 858 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 FCGRTP55899 365 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 MAPKAPK5Q8IW41 473 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 AMOTL1Q8IY63 956 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 SLAIN1Q8ND83 568 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 USP6NLQ92738 828 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 MKL1Q969V6 931 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 SRRDQ9UH36 339 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 PRKG1Q13976 671 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 ZSCAN29Q8IWY8 852 aaPredicted RBP7.93□□□□□ -1.14
LMO3-205ENST00000396205 RAD50Q92878 1312 aa7.93□□□□□ -1.14
LMO3-205ENST00000396205 PATL2C9JE40 543 aaKnown RBP7.92□□□□□ -1.14
LMO3-205ENST00000396205 HIP1O00291 1037 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 PDE1AP54750 535 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 RCSD1Q6JBY9 416 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 ABRAQ8N0Z2 381 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 SOCS4Q8WXH5 440 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 DDRGK1Q96HY6 314 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 EFCC1Q9HA90 598 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 TMX2Q9Y320 296 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 GSG1L2A8MUP6 293 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 ATP2A1O14983 1001 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 CERKLQ49MI3 558 aaPredicted RBP7.92□□□□□ -1.14
LMO3-205ENST00000396205 CTR9Q6PD62 1173 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 NYAP2Q9P242 653 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 FDX1P10109 184 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 ABCB5Q2M3G0 1257 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 CATSPERGQ6ZRH7 1159 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 GMCL1P1Q8NEA9 526 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 TRIM34Q9BYJ4 488 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 TANGO6Q9C0B7 1094 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 BOLA2Q9H3K6 86 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 TCP11L1Q9NUJ3 509 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 TMOD4Q9NZQ9 345 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 PALD1Q9ULE6 856 aa7.92□□□□□ -1.14
LMO3-205ENST00000396205 USP17L15C9J2P7 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 USP17L13C9JLJ4 530 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms