RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 RBM43Q6ZSC3 357 aaKnown RBP14.06□□□□□ -0.16
ITGB1-202ENST00000396033 TBC1D22AQ8WUA7 517 aa14.06□□□□□ -0.16
ITGB1-202ENST00000396033 MRPS27Q92552 414 aaKnown RBP14.06□□□□□ -0.16
ITGB1-202ENST00000396033 CALM1P0DP23 149 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 CALM2P0DP24 149 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 CALM3P0DP25 149 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 PDE6BP35913 854 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 AKAP17AQ02040 695 aaKnown RBP14.05□□□□□ -0.16
ITGB1-202ENST00000396033 SAFBQ15424 915 aaKnown RBP eCLIP14.05□□□□□ -0.16
ITGB1-202ENST00000396033 KINO60870 393 aaKnown RBP14.05□□□□□ -0.16
ITGB1-202ENST00000396033 DDAH1O94760 285 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.164e-6■□□□□ 8.3
ITGB1-202ENST00000396033 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 CERS3Q8IU89 383 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.05□□□□□ -0.16
ITGB1-202ENST00000396033 RBM28Q9NW13 759 aaKnown RBP14.05□□□□□ -0.16
ITGB1-202ENST00000396033 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
ITGB1-202ENST00000396033 MMP1P03956 469 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 MAPKAPK5Q8IW41 473 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 KCNJ14Q9UNX9 436 aa14.05□□□□□ -0.16
ITGB1-202ENST00000396033 ALDH1B1P30837 517 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 RBM10P98175 930 aaKnown RBP14.04□□□□□ -0.16
ITGB1-202ENST00000396033 FBXW7Q969H0 707 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 RNF26Q9BY78 433 aaPredicted RBP14.04□□□□□ -0.16
ITGB1-202ENST00000396033 MRVI1Q9Y6F6 885 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
ITGB1-202ENST00000396033 A0A1W2PQ27 194 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 A0A1W2PQ64 194 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 A0A1W2PQD8 194 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 TROAPQ12815 778 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 SNW1Q13573 536 aaKnown RBP14.04□□□□□ -0.16
ITGB1-202ENST00000396033 OLFM4Q6UX06 510 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 MPNDQ8N594 471 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 SAP30BPQ9UHR5 308 aaKnown RBP14.04□□□□□ -0.16
ITGB1-202ENST00000396033 ROBO3Q96MS0 1386 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 GTF2IP78347 998 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 SASS6Q6UVJ0 657 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
ITGB1-202ENST00000396033 TEX11Q8IYF3 940 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 TMX4Q9H1E5 349 aaPredicted RBP14.04□□□□□ -0.16
ITGB1-202ENST00000396033 USP25Q9UHP3 1055 aa14.04□□□□□ -0.16
ITGB1-202ENST00000396033 FAM205AQ6ZU69 1335 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 MASTLQ96GX5 879 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 COA1Q9GZY4 146 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 MKNK2Q9HBH9 465 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 GPR75-ASB3A0A0A6YYF3 556 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 CTAGE5O15320 804 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 PLCG2P16885 1265 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 DPP8Q6V1X1 898 aaPredicted RBP14.03□□□□□ -0.16
ITGB1-202ENST00000396033 NOSTRINQ8IVI9 506 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 ENGASEQ8NFI3 743 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 CTCFLQ8NI51 663 aaPredicted RBP14.03□□□□□ -0.16
ITGB1-202ENST00000396033 ZC3H12CQ9C0D7 883 aaKnown RBP14.03□□□□□ -0.16
ITGB1-202ENST00000396033 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 A0A1B0GVL5 298 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 BTBD18B2RXH4 712 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 TFAP4Q01664 338 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 SLC39A14Q15043 492 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 FAM200AQ8TCP9 573 aa14.03□□□□□ -0.16
ITGB1-202ENST00000396033 ANO6Q4KMQ2 910 aa14.02□□□□□ -0.16
ITGB1-202ENST00000396033 MYH6P13533 1939 aa14.02□□□□□ -0.16
ITGB1-202ENST00000396033 MARCKSP29966 332 aaPredicted RBP14.02□□□□□ -0.17
ITGB1-202ENST00000396033 TMTC3Q6ZXV5 915 aa14.02□□□□□ -0.17
ITGB1-202ENST00000396033 ZNF622Q969S3 477 aaKnown RBP eCLIP14.02□□□□□ -0.174e-6■■■□□ 15.4
ITGB1-202ENST00000396033 XBP1P17861 261 aa14.02□□□□□ -0.17
ITGB1-202ENST00000396033 NT5C2P49902 561 aa14.02□□□□□ -0.17
ITGB1-202ENST00000396033 GAKO14976 1311 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 NDUFA8P51970 172 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 FUT2Q10981 343 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 FMR1NBQ8N0W7 255 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-202ENST00000396033 JMYQ8N9B5 988 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 FOXP1Q9H334 677 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-202ENST00000396033 FLT1P17948 1338 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 hCG_1642624A0A1W2PR95 340 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 PRPF3O43395 683 aaKnown RBP14.01□□□□□ -0.17
ITGB1-202ENST00000396033 PLCD1P51178 756 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 SLC44A5Q8NCS7 719 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 FAM163AQ96GL9 167 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-202ENST00000396033 KAT14Q9H8E8 782 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 RGPD3A6NKT7 1758 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-202ENST00000396033 RGPD4Q7Z3J3 1758 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 CDK5RAP2Q96SN8 1893 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-202ENST00000396033 TSPY3P0CV98 308 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 TSPY8P0CW00 308 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 MAP3K14Q99558 947 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 VPS54Q9P1Q0 977 aa14.01□□□□□ -0.17
ITGB1-202ENST00000396033 V9GY48 417 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-202ENST00000396033 PLCB2Q00722 1185 aa14□□□□□ -0.17
ITGB1-202ENST00000396033 PKN1Q16512 942 aa14□□□□□ -0.17
ITGB1-202ENST00000396033 AXDND1Q5T1B0 1012 aaPredicted RBP14□□□□□ -0.17
ITGB1-202ENST00000396033 ZNF444Q8N0Y2 327 aaPredicted RBP14□□□□□ -0.17
ITGB1-202ENST00000396033 CNTNAP5Q8WYK1 1306 aa14□□□□□ -0.17
ITGB1-202ENST00000396033 F8W031 263 aaPredicted RBP14□□□□□ -0.17
ITGB1-202ENST00000396033 G3V3G9 751 aa14□□□□□ -0.17
ITGB1-202ENST00000396033 PPP6R2O75170 966 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms