RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 HSD3B2P26439 372 aa8.2□□□□□ -1.1
CDKN3-203ENST00000395577 CHMP4BP1P59074 171 aa8.2□□□□□ -1.1
CDKN3-203ENST00000395577 SNRPNP63162 240 aaKnown RBP8.2□□□□□ -1.1
CDKN3-203ENST00000395577 HID1Q8IV36 788 aa8.2□□□□□ -1.1
CDKN3-203ENST00000395577 MCATQ8IVS2 390 aaKnown RBP8.2□□□□□ -1.1
CDKN3-203ENST00000395577 SMG8Q8ND04 991 aaKnown RBP8.2□□□□□ -1.1
CDKN3-203ENST00000395577 SLC9A7Q96T83 725 aa8.2□□□□□ -1.1
CDKN3-203ENST00000395577 MRPL18Q9H0U6 180 aaKnown RBP8.2□□□□□ -1.1
CDKN3-203ENST00000395577 SUGCTQ9HAC7 445 aa8.2□□□□□ -1.1
CDKN3-203ENST00000395577 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 GNB5O14775 395 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 CLSTN1O94985 981 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 YARSP54577 528 aaKnown RBP8.19□□□□□ -1.1
CDKN3-203ENST00000395577 SOX4Q06945 474 aaPredicted RBP8.19□□□□□ -1.1
CDKN3-203ENST00000395577 SLC6A19Q695T7 634 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 VHLLQ6RSH7 139 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 IGF2-ASQ6U949 168 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 CDC37L1Q7L3B6 337 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 DYMQ7RTS9 669 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 LILRB2Q8N423 598 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 C12orf50Q8NA57 414 aaPredicted RBP8.19□□□□□ -1.1
CDKN3-203ENST00000395577 TMEM87BQ96K49 555 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDKN3-203ENST00000395577 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 SBNO2Q9Y2G9 1366 aa8.19□□□□□ -1.1
CDKN3-203ENST00000395577 PIK3R2O00459 728 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 HCLS1P14317 486 aaPredicted RBP8.18□□□□□ -1.1
CDKN3-203ENST00000395577 DRD2P14416 443 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 ELNP15502 786 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 NTF4P34130 210 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 TTLL4Q14679 1199 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 MTERF2Q49AM1 385 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
CDKN3-203ENST00000395577 MRPL41Q8IXM3 137 aaKnown RBP8.18□□□□□ -1.1
CDKN3-203ENST00000395577 PHACTR4Q8IZ21 702 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 SH3TC2Q8TF17 1288 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 PHAXQ9H814 394 aaKnown RBP8.18□□□□□ -1.1
CDKN3-203ENST00000395577 FBRSQ9HAH7 460 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 MKL2Q9ULH7 1088 aa8.18□□□□□ -1.1
CDKN3-203ENST00000395577 ENPP3O14638 875 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 RNGTTO60942 597 aaKnown RBP8.17□□□□□ -1.1
CDKN3-203ENST00000395577 ARHGEF15O94989 841 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 NEFMP07197 916 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 POLR2BP30876 1174 aaKnown RBP8.17□□□□□ -1.1
CDKN3-203ENST00000395577 NCAPHQ15003 741 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
CDKN3-203ENST00000395577 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 SLFN12Q8IYM2 578 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 KCT2Q8NC54 265 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 PIDD1Q9HB75 910 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 PCDHB10Q9UN67 800 aa8.17□□□□□ -1.1
CDKN3-203ENST00000395577 ASPAP45381 313 aa8.16□□□□□ -1.1
CDKN3-203ENST00000395577 NKG7Q16617 165 aa8.16□□□□□ -1.1
CDKN3-203ENST00000395577 PRRT3Q5FWE3 981 aa8.16□□□□□ -1.1
CDKN3-203ENST00000395577 ST13P5Q8NFI4 369 aaPredicted RBP8.16□□□□□ -1.1
CDKN3-203ENST00000395577 ISL2Q96A47 359 aa8.16□□□□□ -1.1
CDKN3-203ENST00000395577 ZNF775Q96BV0 537 aaPredicted RBP8.16□□□□□ -1.1
CDKN3-203ENST00000395577 KIF2CQ99661 725 aa8.16□□□□□ -1.1
CDKN3-203ENST00000395577 DPH2Q9BQC3 489 aaPredicted RBP8.16□□□□□ -1.1
CDKN3-203ENST00000395577 KANSL2Q9H9L4 492 aa8.16□□□□□ -1.1
CDKN3-203ENST00000395577 SSU72Q9NP77 194 aaKnown RBP8.16□□□□□ -1.1
CDKN3-203ENST00000395577 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
CDKN3-203ENST00000395577 TIAF1O95411 115 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 CCNFP41002 786 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 GNPTABQ3T906 1256 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 KIAA1211LQ6NV74 962 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 TREML4Q6UXN2 200 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 EEPD1Q7L9B9 569 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 UBE3DQ7Z6J8 389 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 AGGF1Q8N302 714 aaeCLIP8.15□□□□□ -1.1
CDKN3-203ENST00000395577 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.1
CDKN3-203ENST00000395577 ACTL7BQ9Y614 415 aa8.15□□□□□ -1.1
CDKN3-203ENST00000395577 KDM2BQ8NHM5 1336 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
CDKN3-203ENST00000395577 RGS13O14921 159 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 GBP1P32455 592 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 SLC7A5Q01650 507 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 SLBPQ14493 270 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDKN3-203ENST00000395577 ANKRD34AQ69YU3 496 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 SPATC1Q76KD6 591 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 TMEM130Q8N3G9 435 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 C2CD4AQ8NCU7 369 aaPredicted RBP8.14□□□□□ -1.11
CDKN3-203ENST00000395577 APPBP2Q92624 585 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 CCDC74BQ96LY2 380 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 FAM105AQ9NUU6 356 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 FANCLQ9NW38 375 aa8.14□□□□□ -1.11
CDKN3-203ENST00000395577 NOP53Q9NZM5 478 aaKnown RBP8.14□□□□□ -1.11
CDKN3-203ENST00000395577 ZNF214Q9UL59 606 aaPredicted RBP8.14□□□□□ -1.11
CDKN3-203ENST00000395577 DCAF1Q9Y4B6 1507 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 ESYT3A0FGR9 886 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 PPM1GO15355 546 aaPredicted RBP8.13□□□□□ -1.11
CDKN3-203ENST00000395577 DIAPH1O60610 1272 aaKnown RBP8.13□□□□□ -1.11
CDKN3-203ENST00000395577 CDC45O75419 566 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 CST3P01034 146 aaPredicted RBP8.13□□□□□ -1.11
CDKN3-203ENST00000395577 SSRP1Q08945 709 aaKnown RBP8.13□□□□□ -1.11
CDKN3-203ENST00000395577 GRIK4Q16099 956 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 SMYD4Q8IYR2 804 aaPredicted RBP8.13□□□□□ -1.11
CDKN3-203ENST00000395577 BAHD1Q8TBE0 780 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms