RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 RBBP6Q7Z6E9 1792 aaKnown RBP19.85■□□□□ 0.77
ATG13-202ENST00000395549 MBD4O95243 580 aa19.85■□□□□ 0.77
ATG13-202ENST00000395549 CHGBP05060 677 aa19.85■□□□□ 0.77
ATG13-202ENST00000395549 POLR3DP05423 398 aaPredicted RBP19.85■□□□□ 0.77
ATG13-202ENST00000395549 MLLT1Q03111 559 aaPredicted RBP19.85■□□□□ 0.77
ATG13-202ENST00000395549 WDR18Q9BV38 432 aa19.85■□□□□ 0.77
ATG13-202ENST00000395549 GINM1Q9NU53 330 aa19.85■□□□□ 0.77
ATG13-202ENST00000395549 MCM9Q9NXL9 1143 aa19.85■□□□□ 0.77
ATG13-202ENST00000395549 BCRP11274 1271 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 PLCD1P51178 756 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 MTMR2Q13614 643 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 UBE3CQ15386 1083 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 TATDN1Q6P1N9 297 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 SMCR8Q8TEV9 937 aaPredicted RBP19.84■□□□□ 0.77
ATG13-202ENST00000395549 PNMA3Q9UL41 463 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 PTCH2Q9Y6C5 1203 aa19.84■□□□□ 0.77
ATG13-202ENST00000395549 GH2P01242 217 aa19.83■□□□□ 0.77
ATG13-202ENST00000395549 CTGFP29279 349 aa19.83■□□□□ 0.77
ATG13-202ENST00000395549 PSMC4P43686 418 aa19.83■□□□□ 0.77
ATG13-202ENST00000395549 SH3D19Q5HYK7 790 aa19.83■□□□□ 0.77
ATG13-202ENST00000395549 DCP1AQ9NPI6 582 aaPredicted RBP19.83■□□□□ 0.77
ATG13-202ENST00000395549 PRKAB2O43741 272 aa19.82■□□□□ 0.76
ATG13-202ENST00000395549 FMNL1O95466 1100 aaPredicted RBP19.82■□□□□ 0.76
ATG13-202ENST00000395549 GNRH1P01148 92 aa19.82■□□□□ 0.76
ATG13-202ENST00000395549 BACE1P56817 501 aa19.82■□□□□ 0.76
ATG13-202ENST00000395549 EVX2Q03828 476 aa19.82■□□□□ 0.76
ATG13-202ENST00000395549 TRIM47Q96LD4 638 aa19.82■□□□□ 0.76
ATG13-202ENST00000395549 TMOD4Q9NZQ9 345 aa19.82■□□□□ 0.76
ATG13-202ENST00000395549 DOCK3Q8IZD9 2030 aa19.81■□□□□ 0.76
ATG13-202ENST00000395549 CYP2D6P10635 497 aa19.81■□□□□ 0.76
ATG13-202ENST00000395549 SHMT1P34896 483 aa19.81■□□□□ 0.76
ATG13-202ENST00000395549 PABPC4Q13310 644 aaKnown RBP eCLIP19.81■□□□□ 0.76
ATG13-202ENST00000395549 CERKLQ49MI3 558 aaPredicted RBP19.81■□□□□ 0.76
ATG13-202ENST00000395549 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
ATG13-202ENST00000395549 OTUD7AQ8TE49 926 aaPredicted RBP19.81■□□□□ 0.76
ATG13-202ENST00000395549 ARMC5Q96C12 935 aa19.81■□□□□ 0.76
ATG13-202ENST00000395549 TNRC18O15417 2968 aaPredicted RBP19.8■□□□□ 0.76
ATG13-202ENST00000395549 TTC41PQ6P2S7 1318 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 USP17L10C9JJH3 530 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 OSBPP22059 807 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 PRMT2P55345 433 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 GABPAQ06546 454 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 ABCB5Q2M3G0 1257 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 SLC9C1Q4G0N8 1177 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 PUS7LQ9H0K6 701 aaKnown RBP19.8■□□□□ 0.76
ATG13-202ENST00000395549 ATP8A2Q9NTI2 1148 aa19.8■□□□□ 0.76
ATG13-202ENST00000395549 C19orf81C9J6K1 198 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 HOXD10P28358 340 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 FCGRTP55899 365 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 RAB3GAP1Q15042 981 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 ANKRD13CQ8N6S4 541 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 ASCC2Q9H1I8 757 aaPredicted RBP19.79■□□□□ 0.76
ATG13-202ENST00000395549 CABP5Q9NP86 173 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 ZBTB47Q9UFB7 747 aaPredicted RBP19.79■□□□□ 0.76
ATG13-202ENST00000395549 SRRDQ9UH36 339 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 SLC4A4Q9Y6R1 1079 aa19.79■□□□□ 0.76
ATG13-202ENST00000395549 KIAA0100Q14667 2235 aaKnown RBP19.79■□□□□ 0.76
ATG13-202ENST00000395549 MYPNQ86TC9 1320 aa19.78■□□□□ 0.76
ATG13-202ENST00000395549 ERC2O15083 957 aa19.78■□□□□ 0.76
ATG13-202ENST00000395549 HDAC1Q13547 482 aaPredicted RBP19.78■□□□□ 0.76
ATG13-202ENST00000395549 ANKRD45Q5TZF3 282 aa19.78■□□□□ 0.76
ATG13-202ENST00000395549 PI4K2BQ8TCG2 481 aa19.78■□□□□ 0.76
ATG13-202ENST00000395549 DDRGK1Q96HY6 314 aa19.78■□□□□ 0.76
ATG13-202ENST00000395549 FEZ1Q99689 392 aa19.78■□□□□ 0.76
ATG13-202ENST00000395549 GLRX3O76003 335 aaKnown RBP19.77■□□□□ 0.76
ATG13-202ENST00000395549 MX1P20591 662 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 IRX3P78415 501 aaPredicted RBP19.77■□□□□ 0.76
ATG13-202ENST00000395549 ZYXQ15942 572 aaKnown RBP19.77■□□□□ 0.76
ATG13-202ENST00000395549 USP17L2Q6R6M4 530 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 NBPF11Q86T75 865 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 AMOTL1Q8IY63 956 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 SLC44A5Q8NCS7 719 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 SH3TC2Q8TF17 1288 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 GCC1Q96CN9 775 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 DYNLL2Q96FJ2 89 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 ZNF333Q96JL9 665 aa19.77■□□□□ 0.76
ATG13-202ENST00000395549 CYP2D7A0A087X1C5 515 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 MPHOSPH10O00566 681 aaKnown RBP19.76■□□□□ 0.75
ATG13-202ENST00000395549 RNF113AO15541 343 aaKnown RBP19.76■□□□□ 0.75
ATG13-202ENST00000395549 GCLCP48506 637 aaPredicted RBP19.76■□□□□ 0.75
ATG13-202ENST00000395549 AAMPQ13685 434 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 FAM110CQ1W6H9 321 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 RAET1EQ8TD07 263 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 APPBP2Q92624 585 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 EMILIN3Q9NT22 766 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 SWAP70Q9UH65 585 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 SALL3Q9BXA9 1300 aa19.76■□□□□ 0.75
ATG13-202ENST00000395549 POTEFA5A3E0 1075 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 USP17L12C9JPN9 530 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 USP17L21D6R901 530 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 ZFYP08048 801 aaPredicted RBP19.75■□□□□ 0.75
ATG13-202ENST00000395549 HOXA7P31268 230 aaPredicted RBP19.75■□□□□ 0.75
ATG13-202ENST00000395549 GUCY1A2P33402 732 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 PRKCZQ05513 592 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 SEPT2Q15019 361 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 ACER1Q8TDN7 264 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 OSBP2Q969R2 916 aa19.75■□□□□ 0.75
ATG13-202ENST00000395549 STRBPQ96SI9 672 aaKnown RBP19.75■□□□□ 0.75
ATG13-202ENST00000395549 BRCA2P51587 3418 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms