RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 C19orf81C9J6K1 198 aa16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 CHGBP05060 677 aa16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 ZFYP08048 801 aaPredicted RBP16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 MX1P20591 662 aa16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 CERKLQ49MI3 558 aaPredicted RBP16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 OTUD7AQ8TE49 926 aaPredicted RBP16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 PUS7LQ9H0K6 701 aaKnown RBP16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 CPA4Q9UI42 421 aa16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 MYH7P12883 1935 aa16.85■□□□□ 0.29
HLA-DMA-203ENST00000395305 PTPRFP10586 1907 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 PRKAB2O43741 272 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 GDF11O95390 407 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 GNRH1P01148 92 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 CYP2C8P10632 490 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 BACE1P56817 501 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 CAP1Q01518 475 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 GABPAQ06546 454 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 STAP2Q9UGK3 403 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 ZBTB21Q9ULJ3 1066 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 ADGRA2Q96PE1 1338 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
HLA-DMA-203ENST00000395305 USP17L10C9JJH3 530 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 GH2P01242 217 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 SHMT1P34896 483 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 RGS19P49795 217 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 HMGCS2P54868 508 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 PABPC4Q13310 644 aaKnown RBP eCLIP16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 SHROOM1Q2M3G4 852 aaPredicted RBP16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 SMC5Q8IY18 1101 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 APPBP2Q92624 585 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 STRBPQ96SI9 672 aaKnown RBP16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 SLC4A4Q9Y6R1 1079 aa16.83■□□□□ 0.28
HLA-DMA-203ENST00000395305 BCRP11274 1271 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 ABCB5Q2M3G0 1257 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 TREML2Q5T2D2 321 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 C12orf60Q5U649 245 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 OSBP2Q969R2 916 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 CABP5Q9NP86 173 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 TMOD4Q9NZQ9 345 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 PNMA3Q9UL41 463 aa16.82■□□□□ 0.28
HLA-DMA-203ENST00000395305 USP17L12C9JPN9 530 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 USP17L21D6R901 530 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 IGHDP01880 384 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 CYP2D6P10635 497 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 OSBPP22059 807 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 MTMR2Q13614 643 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 GIMAP6Q6P9H5 292 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
HLA-DMA-203ENST00000395305 HOXD10P28358 340 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 HOXA7P31268 230 aaPredicted RBP16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 PSMC4P43686 418 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 PDE1AP54750 535 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 PRMT2P55345 433 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 EVX2Q03828 476 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 CTR9Q6PD62 1173 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 USP17L2Q6R6M4 530 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 SMCR8Q8TEV9 937 aaPredicted RBP16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 ARHGAP39Q9C0H5 1083 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 HTTP42858 3142 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
HLA-DMA-203ENST00000395305 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 GNAT2P19087 354 aa16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 DYNLL2Q96FJ2 89 aa16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 DDX60LQ5H9U9 1706 aaKnown RBP16.79■□□□□ 0.28
HLA-DMA-203ENST00000395305 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 FMNL1O95466 1100 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 CTGFP29279 349 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 GUCY1A2P33402 732 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 USP14P54578 494 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 NUCB1Q02818 461 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 SBK1Q52WX2 424 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 EVI5LQ96CN4 794 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 CCDC17Q96LX7 622 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 FSD1Q9BTV5 496 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 LNPKQ9C0E8 428 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 EMILIN3Q9NT22 766 aa16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 BAZ2AQ9UIF9 1905 aaKnown RBP16.78■□□□□ 0.28
HLA-DMA-203ENST00000395305 LOC285556D6RIA3 1793 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 CYP2D7A0A087X1C5 515 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 GPAA1O43292 621 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 CDK8P49336 464 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 SEPT2Q15019 361 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 KIAA1683Q9H0B3 1180 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 SRRDQ9UH36 339 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 PTCH2Q9Y6C5 1203 aa16.77■□□□□ 0.28
HLA-DMA-203ENST00000395305 M0R2C6 588 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms