RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 RNF186Q9NXI6 227 aa10.1□□□□□ -0.79
HERC4-203ENST00000395185 SAGE1Q9NXZ1 904 aa10.1□□□□□ -0.79
HERC4-203ENST00000395185 AATFQ9NY61 560 aaKnown RBP eCLIP10.1□□□□□ -0.79
HERC4-203ENST00000395185 MBD4O95243 580 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 GNAT2P19087 354 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 USP5P45974 858 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 GTF2A2P52657 109 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 RHBDL3P58872 404 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 ERO1BQ86YB8 467 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 FOXP4Q8IVH2 680 aaPredicted RBP10.09□□□□□ -0.79
HERC4-203ENST00000395185 LCORLQ8N3X6 602 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.09□□□□□ -0.79
HERC4-203ENST00000395185 TGFBRAP1Q8WUH2 860 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
HERC4-203ENST00000395185 OPTNQ96CV9 577 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 ZIC5Q96T25 663 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 ELP3Q9H9T3 547 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 PICK1Q9NRD5 415 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 PI4KBQ9UBF8 816 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 PALD1Q9ULE6 856 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 FZD1Q9UP38 647 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 RBM8AQ9Y5S9 174 aaKnown RBP10.09□□□□□ -0.79
HERC4-203ENST00000395185 DOCK2Q92608 1830 aa10.09□□□□□ -0.79
HERC4-203ENST00000395185 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 SLC27A2O14975 620 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 PRKAB2O43741 272 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 TBC1D12O60347 775 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 HLA-DOAP06340 250 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 HSPA8P11142 646 aaKnown RBP10.08□□□□□ -0.8
HERC4-203ENST00000395185 DYNLL1P63167 89 aaKnown RBP10.08□□□□□ -0.8
HERC4-203ENST00000395185 VGLL4Q14135 290 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 CREB3L3Q68CJ9 461 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.08□□□□□ -0.8
HERC4-203ENST00000395185 ZFPM1Q8IX07 1006 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 SH3RF3Q8TEJ3 882 aaPredicted RBP10.08□□□□□ -0.8
HERC4-203ENST00000395185 DDRGK1Q96HY6 314 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 CLMNQ96JQ2 1002 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 TM6SF1Q9BZW5 370 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 ARMT1Q9H993 441 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.08□□□□□ -0.8
HERC4-203ENST00000395185 EPB41L4AQ9HCS5 686 aaPredicted RBP10.08□□□□□ -0.8
HERC4-203ENST00000395185 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 SNX14Q9Y5W7 946 aa10.08□□□□□ -0.8
HERC4-203ENST00000395185 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
HERC4-203ENST00000395185 CYP21A2P08686 494 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 FGRP09769 529 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 CETPP11597 493 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 PPATQ06203 517 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 SNAPC2Q13487 334 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 IER5LQ5T953 404 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 IFNL3Q8IZI9 196 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 TNS4Q8IZW8 715 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
HERC4-203ENST00000395185 MIGA1Q8NAN2 632 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 ZKSCAN4Q969J2 545 aaPredicted RBP10.07□□□□□ -0.8
HERC4-203ENST00000395185 CRNKL1Q9BZJ0 848 aaKnown RBP10.07□□□□□ -0.8
HERC4-203ENST00000395185 OSBPL5Q9H0X9 879 aaPredicted RBP10.07□□□□□ -0.8
HERC4-203ENST00000395185 ATP8A2Q9NTI2 1148 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 HERC5Q9UII4 1024 aaKnown RBP10.07□□□□□ -0.8
HERC4-203ENST00000395185 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 ZNF112Q9UJU3 913 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 ANAPC4Q9UJX5 808 aa10.07□□□□□ -0.8
HERC4-203ENST00000395185 DDTLA6NHG4 134 aaPredicted RBP10.06□□□□□ -0.8
HERC4-203ENST00000395185 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 MAP3K10Q02779 954 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 SBK1Q52WX2 424 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 COL13A1Q5TAT6 717 aaPredicted RBP10.06□□□□□ -0.8
HERC4-203ENST00000395185 TTC6Q86TZ1 520 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 MAPKAPK5Q8IW41 473 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 AMOTL1Q8IY63 956 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 SNX21Q969T3 373 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 ALDH8A1Q9H2A2 487 aaPredicted RBP10.06□□□□□ -0.8
HERC4-203ENST00000395185 ZSWIM6Q9HCJ5 1215 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 DCP1AQ9NPI6 582 aaPredicted RBP10.06□□□□□ -0.8
HERC4-203ENST00000395185 DDX4Q9NQI0 724 aaKnown RBP10.06□□□□□ -0.8
HERC4-203ENST00000395185 TSKSQ9UJT2 592 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 TAF6LQ9Y6J9 622 aa10.06□□□□□ -0.8
HERC4-203ENST00000395185 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
HERC4-203ENST00000395185 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
HERC4-203ENST00000395185 CXCL11O14625 94 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 POLR3DP05423 398 aaPredicted RBP10.05□□□□□ -0.8
HERC4-203ENST00000395185 MCCP23508 829 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 PPIL2Q13356 520 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 ARHGEF6Q15052 776 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 RABEP1Q15276 862 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 STOX1Q6ZVD7 989 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 FASTKD5Q7L8L6 764 aaKnown RBP10.05□□□□□ -0.8
HERC4-203ENST00000395185 SCYL3Q8IZE3 742 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 TACC3Q9Y6A5 838 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 ZHX2Q9Y6X8 837 aa10.05□□□□□ -0.8
HERC4-203ENST00000395185 ZNF646O15015 1829 aaPredicted RBP10.05□□□□□ -0.8
HERC4-203ENST00000395185 AK9Q5TCS8 1911 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 CCL15-CCL14A0A0B4J2E2 113 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 PHF20L1A8MW92 1017 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms