RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
VPS26A-203ENST00000395098 NSUN7Q8NE18 718 aaKnown RBP15.39■□□□□ 0.05
VPS26A-203ENST00000395098 DPF2Q92785 391 aa15.39■□□□□ 0.05
VPS26A-203ENST00000395098 CNOT7Q9UIV1 285 aaKnown RBP15.39■□□□□ 0.05
VPS26A-203ENST00000395098 SERPINB13Q9UIV8 391 aa15.39■□□□□ 0.05
VPS26A-203ENST00000395098 CCDC69A6NI79 296 aa15.39■□□□□ 0.05
VPS26A-203ENST00000395098 RCSD1Q6JBY9 416 aa15.39■□□□□ 0.05
VPS26A-203ENST00000395098 SLC12A7Q9Y666 1083 aa15.39■□□□□ 0.05
VPS26A-203ENST00000395098 SBF1O95248 1867 aa15.39■□□□□ 0.05
VPS26A-203ENST00000395098 CNTNAP1P78357 1384 aa15.39■□□□□ 0.05
VPS26A-203ENST00000395098 FAM196BA6NMK8 535 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 ENTPD3O75355 529 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 CDC27P30260 824 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-203ENST00000395098 VEZTQ9HBM0 779 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 FAM217BQ9NTX9 383 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-203ENST00000395098 RNF181Q9P0P0 153 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
VPS26A-203ENST00000395098 ZBTB43O43298 467 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 HLA-DOAP06340 250 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 TSPY3P0CV98 308 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 TSPY8P0CW00 308 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 SHMT1P34896 483 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 ADD1P35611 737 aaKnown RBP15.38■□□□□ 0.05
VPS26A-203ENST00000395098 METAP2P50579 478 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS26A-203ENST00000395098 SMARCC2Q8TAQ2 1214 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 DDX11Q96FC9 970 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 DHX36Q9H2U1 1008 aaKnown RBP15.38■□□□□ 0.05
VPS26A-203ENST00000395098 SIPA1L1O43166 1804 aa15.38■□□□□ 0.05
VPS26A-203ENST00000395098 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-203ENST00000395098 IFIT1BQ5T764 474 aaKnown RBP15.37■□□□□ 0.05
VPS26A-203ENST00000395098 CDAN1Q8IWY9 1227 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 ZNF654Q8IZM8 581 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS26A-203ENST00000395098 EHD4Q9H223 541 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 ZNF287Q9HBT7 754 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 TMOD2Q9NZR1 351 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 ATRNL1Q5VV63 1379 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 PTPDC1A2A3K4 754 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 SYT1P21579 422 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 TBC1D10BQ4KMP7 808 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-203ENST00000395098 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-203ENST00000395098 TMTC2Q8N394 836 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-203ENST00000395098 TNPO1Q92973 898 aaKnown RBP15.37■□□□□ 0.05
VPS26A-203ENST00000395098 PI4KBQ9UBF8 816 aa15.37■□□□□ 0.05
VPS26A-203ENST00000395098 C9orf131Q5VYM1 1079 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 GPC2Q8N158 579 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 LLPHQ9BRT6 129 aaKnown RBP15.36■□□□□ 0.05
VPS26A-203ENST00000395098 DICER1Q9UPY3 1922 aaKnown RBP15.36■□□□□ 0.05
VPS26A-203ENST00000395098 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 AKR1B1P15121 316 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 NUCB2P80303 420 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 NEDD1Q8NHV4 660 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 TMEM39BQ9GZU3 492 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 TCP11L1Q9NUJ3 509 aa15.36■□□□□ 0.05
VPS26A-203ENST00000395098 DDNO94850 711 aaPredicted RBP15.35■□□□□ 0.05
VPS26A-203ENST00000395098 BRD1O95696 1058 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 FDPSP14324 419 aaKnown RBP15.35■□□□□ 0.05
VPS26A-203ENST00000395098 GPR162Q16538 588 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
VPS26A-203ENST00000395098 NUP133Q8WUM0 1156 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 FAM151AQ8WW52 585 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 SWAP70Q9UH65 585 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 MYO1BO43795 1136 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 NT5C2P49902 561 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 TROAPQ12815 778 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 CSRNP1Q96S65 589 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
VPS26A-203ENST00000395098 EPS15P42566 896 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 MMP14P50281 582 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 NTRK3Q16288 839 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 KIF4BQ2VIQ3 1234 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 SYNE3Q6ZMZ3 975 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
VPS26A-203ENST00000395098 DGKHQ86XP1 1220 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 CLEC10AQ8IUN9 316 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-203ENST00000395098 NID2Q14112 1375 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-203ENST00000395098 STX6O43752 255 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 TRPM4Q8TD43 1214 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 ANKS1AQ92625 1134 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 CHAMP1Q96JM3 812 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 PGAP2Q9UHJ9 254 aa15.34■□□□□ 0.05
VPS26A-203ENST00000395098 CPLX1O14810 134 aa15.33■□□□□ 0.05
VPS26A-203ENST00000395098 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.05
VPS26A-203ENST00000395098 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.05
VPS26A-203ENST00000395098 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.05
VPS26A-203ENST00000395098 STX8Q9UNK0 236 aa15.33■□□□□ 0.05
VPS26A-203ENST00000395098 PLIN4Q96Q06 1357 aa15.33■□□□□ 0.04
VPS26A-203ENST00000395098 DHX16O60231 1041 aaKnown RBP15.33■□□□□ 0.04
VPS26A-203ENST00000395098 RRP1BQ14684 758 aaKnown RBP15.33■□□□□ 0.04
VPS26A-203ENST00000395098 NFKBIBQ15653 356 aa15.33■□□□□ 0.04
VPS26A-203ENST00000395098 RTN1Q16799 776 aa15.33■□□□□ 0.04
VPS26A-203ENST00000395098 CATIPQ7Z7H3 387 aa15.33■□□□□ 0.04
VPS26A-203ENST00000395098 PHKBQ93100 1093 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms