RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CCL14Q16627 93 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 LRRC26Q2I0M4 334 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 LHX8Q68G74 356 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 POTEEQ6S8J3 1075 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 NEUROD6Q96NK8 337 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 PORCNQ9H237 461 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 RBPJLQ9UBG7 517 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 HDAC5Q9UQL6 1122 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 MYH1P12882 1939 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 SRGAP3O43295 1099 aa19.53■□□□□ 0.72
SNCA-205ENST00000394991 ZKSCAN1P17029 563 aaPredicted RBP19.53■□□□□ 0.72
SNCA-205ENST00000394991 MCAMP43121 646 aa19.53■□□□□ 0.72
SNCA-205ENST00000394991 Q3C1V9 767 aa19.53■□□□□ 0.72
SNCA-205ENST00000394991 GPRC5AQ8NFJ5 357 aa19.53■□□□□ 0.72
SNCA-205ENST00000394991 API5Q9BZZ5 524 aaKnown RBP19.53■□□□□ 0.72
SNCA-205ENST00000394991 TMOD4Q9NZQ9 345 aa19.53■□□□□ 0.72
SNCA-205ENST00000394991 PI4KBQ9UBF8 816 aa19.53■□□□□ 0.72
SNCA-205ENST00000394991 ASNSP08243 561 aa19.52■□□□□ 0.72
SNCA-205ENST00000394991 MTX1Q13505 466 aa19.52■□□□□ 0.72
SNCA-205ENST00000394991 GDF11O95390 407 aa19.51■□□□□ 0.71
SNCA-205ENST00000394991 MAPK4P31152 587 aa19.51■□□□□ 0.71
SNCA-205ENST00000394991 ERVK-9P63128 1117 aa19.51■□□□□ 0.71
SNCA-205ENST00000394991 ERVK-24P63145 666 aa19.51■□□□□ 0.71
SNCA-205ENST00000394991 MDM2Q00987 491 aaPredicted RBP19.51■□□□□ 0.71
SNCA-205ENST00000394991 MORN1Q5T089 497 aa19.51■□□□□ 0.71
SNCA-205ENST00000394991 GPR142Q7Z601 462 aa19.51■□□□□ 0.71
SNCA-205ENST00000394991 TRMT44Q8IYL2 757 aaKnown RBP19.51■□□□□ 0.71
SNCA-205ENST00000394991 TRMT2AQ8IZ69 625 aaKnown RBP19.51■□□□□ 0.71
SNCA-205ENST00000394991 AATFQ9NY61 560 aaKnown RBP eCLIP19.51■□□□□ 0.71
SNCA-205ENST00000394991 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
SNCA-205ENST00000394991 C19orf81C9J6K1 198 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 PDE3AQ14432 1141 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 GORABQ5T7V8 394 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
SNCA-205ENST00000394991 MAPKAPK5Q8IW41 473 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 PAGR1Q9BTK6 254 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 COL25A1Q9BXS0 654 aaPredicted RBP19.5■□□□□ 0.71
SNCA-205ENST00000394991 DHX36Q9H2U1 1008 aaKnown RBP19.5■□□□□ 0.71
SNCA-205ENST00000394991 ZBTB21Q9ULJ3 1066 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 RLFQ13129 1914 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 FLT1P17948 1338 aa19.5■□□□□ 0.71
SNCA-205ENST00000394991 USP17L10C9JJH3 530 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 RGS2P41220 211 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 PLEKHH3Q7Z736 793 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 TGFBRAP1Q8WUH2 860 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 GUCD1Q96NT3 240 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 APBA2Q99767 749 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 EMILIN3Q9NT22 766 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 LRP2BPQ9P2M1 347 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 DNAH12Q6ZR08 3092 aa19.49■□□□□ 0.71
SNCA-205ENST00000394991 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
SNCA-205ENST00000394991 CNMDO75829 334 aa19.47■□□□□ 0.71
SNCA-205ENST00000394991 GNAI3P08754 354 aa19.47■□□□□ 0.71
SNCA-205ENST00000394991 UQCRFS1P1P0C7P4 283 aa19.47■□□□□ 0.71
SNCA-205ENST00000394991 PPP4CP60510 307 aa19.47■□□□□ 0.71
SNCA-205ENST00000394991 NAA16Q6N069 864 aaPredicted RBP19.47■□□□□ 0.71
SNCA-205ENST00000394991 NOL10Q9BSC4 688 aaKnown RBP19.47■□□□□ 0.71
SNCA-205ENST00000394991 GINM1Q9NU53 330 aa19.47■□□□□ 0.71
SNCA-205ENST00000394991 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
SNCA-205ENST00000394991 PALD1Q9ULE6 856 aa19.47■□□□□ 0.71
SNCA-205ENST00000394991 LAMA2P24043 3122 aaKnown RBP19.47■□□□□ 0.71
SNCA-205ENST00000394991 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
SNCA-205ENST00000394991 MAP2K5Q13163 448 aa19.46■□□□□ 0.71
SNCA-205ENST00000394991 FOXP4Q8IVH2 680 aaPredicted RBP19.46■□□□□ 0.71
SNCA-205ENST00000394991 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.46■□□□□ 0.71
SNCA-205ENST00000394991 CRACR2BQ8N4Y2 399 aaPredicted RBP19.46■□□□□ 0.71
SNCA-205ENST00000394991 GTF3C2Q8WUA4 911 aaPredicted RBP19.46■□□□□ 0.71
SNCA-205ENST00000394991 PNMA6EA0A0J9YXQ4 647 aa19.45■□□□□ 0.7
SNCA-205ENST00000394991 BAG3O95817 575 aa19.45■□□□□ 0.7
SNCA-205ENST00000394991 CT47B1P0C2W7 299 aaPredicted RBP19.45■□□□□ 0.7
SNCA-205ENST00000394991 PLCG2P16885 1265 aa19.45■□□□□ 0.7
SNCA-205ENST00000394991 FAM109BQ6ICB4 259 aaPredicted RBP19.45■□□□□ 0.7
SNCA-205ENST00000394991 USP17L2Q6R6M4 530 aa19.45■□□□□ 0.7
SNCA-205ENST00000394991 CCAR1Q8IX12 1150 aaKnown RBP19.45■□□□□ 0.7
SNCA-205ENST00000394991 SAP30BPQ9UHR5 308 aaKnown RBP19.45■□□□□ 0.7
SNCA-205ENST00000394991 NDUFB9Q9Y6M9 179 aa19.45■□□□□ 0.7
SNCA-205ENST00000394991 FAM161BQ96MY7 647 aa19.44■□□□□ 0.7
SNCA-205ENST00000394991 TRIM34Q9BYJ4 488 aa19.44■□□□□ 0.7
SNCA-205ENST00000394991 SENP6Q9GZR1 1112 aaPredicted RBP19.44■□□□□ 0.7
SNCA-205ENST00000394991 ZNF236Q9UL36 1845 aa19.44■□□□□ 0.7
SNCA-205ENST00000394991 GH2P01242 217 aa19.43■□□□□ 0.7
SNCA-205ENST00000394991 CYP2E1P05181 493 aaPredicted RBP19.43■□□□□ 0.7
SNCA-205ENST00000394991 RARSP54136 660 aaKnown RBP19.43■□□□□ 0.7
SNCA-205ENST00000394991 ZYXQ15942 572 aaKnown RBP19.43■□□□□ 0.7
SNCA-205ENST00000394991 EDC3Q96F86 508 aaKnown RBP19.43■□□□□ 0.7
SNCA-205ENST00000394991 C12orf42Q96LP6 360 aa19.43■□□□□ 0.7
SNCA-205ENST00000394991 DBNDD2Q9BQY9 259 aa19.43■□□□□ 0.7
SNCA-205ENST00000394991 RABGAP1Q9Y3P9 1069 aa19.43■□□□□ 0.7
SNCA-205ENST00000394991 ATN1P54259 1190 aaPredicted RBP19.42■□□□□ 0.7
SNCA-205ENST00000394991 DYNLL1P63167 89 aaKnown RBP19.42■□□□□ 0.7
SNCA-205ENST00000394991 G3BP1Q13283 466 aaKnown RBP eCLIP19.42■□□□□ 0.7
SNCA-205ENST00000394991 CWC22Q9HCG8 908 aaKnown RBP19.42■□□□□ 0.7
SNCA-205ENST00000394991 DDX20Q9UHI6 824 aaKnown RBP19.42■□□□□ 0.7
SNCA-205ENST00000394991 TNNQ9UQP3 1299 aa19.42■□□□□ 0.7
SNCA-205ENST00000394991 PTPREP23469 700 aa19.41■□□□□ 0.7
SNCA-205ENST00000394991 TTC39AQ5SRH9 613 aa19.41■□□□□ 0.7
SNCA-205ENST00000394991 MFSD14CQ5VZR4 134 aa19.41■□□□□ 0.7
SNCA-205ENST00000394991 TRPV1Q8NER1 839 aa19.41■□□□□ 0.7
SNCA-205ENST00000394991 NPLOC4Q8TAT6 608 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms