RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 SCN9AQ15858 1988 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 PICALMQ13492 652 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 C7orf43Q8WVR3 580 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 CNKSR1Q969H4 720 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 IL17RBQ9NRM6 502 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 STK36Q9NRP7 1315 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 MYH1P12882 1939 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 hCG_1642624A0A1W2PR95 340 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 PLEKHA8P1O95397 391 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 RCSD1Q6JBY9 416 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 ILDR2Q71H61 639 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 ZNF396Q96N95 335 aaPredicted RBP20.36■□□□□ 0.85
RUFY1-203ENST00000393448 ROBO3Q96MS0 1386 aa20.36■□□□□ 0.85
RUFY1-203ENST00000393448 DDX60LQ5H9U9 1706 aaKnown RBP20.35■□□□□ 0.85
RUFY1-203ENST00000393448 CCDC196A0A1B0GTZ2 297 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 USP17L3A6NCW0 530 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 USP17L4A6NCW7 530 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 PLCG2P16885 1265 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 RCAN1P53805 252 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 USP17L1Q7RTZ2 530 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 RCOR1Q9UKL0 485 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 BAZ2BQ9UIF8 2168 aaKnown RBP20.35■□□□□ 0.85
RUFY1-203ENST00000393448 C21orf2O43822 256 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 AOC3Q16853 763 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 TRIM22Q8IYM9 498 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 BICD2Q8TD16 824 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 CLIC4Q9Y696 253 aa20.35■□□□□ 0.85
RUFY1-203ENST00000393448 MYH6P13533 1939 aa20.34■□□□□ 0.85
RUFY1-203ENST00000393448 ECE2O60344 883 aa20.34■□□□□ 0.85
RUFY1-203ENST00000393448 MYSM1Q5VVJ2 828 aa20.34■□□□□ 0.85
RUFY1-203ENST00000393448 KCNJ14Q9UNX9 436 aa20.34■□□□□ 0.85
RUFY1-203ENST00000393448 PODNQ7Z5L7 613 aa20.33■□□□□ 0.85
RUFY1-203ENST00000393448 CERS3Q8IU89 383 aa20.33■□□□□ 0.85
RUFY1-203ENST00000393448 DACT1Q9NYF0 836 aa20.33■□□□□ 0.85
RUFY1-203ENST00000393448 PCDHAC2Q9Y5I4 1007 aa20.33■□□□□ 0.85
RUFY1-203ENST00000393448 TRIM29Q14134 588 aa20.33■□□□□ 0.84
RUFY1-203ENST00000393448 CAMK4Q16566 473 aa20.33■□□□□ 0.84
RUFY1-203ENST00000393448 BRAPQ7Z569 592 aa20.33■□□□□ 0.84
RUFY1-203ENST00000393448 KIAA0825Q8IV33 1275 aa20.33■□□□□ 0.84
RUFY1-203ENST00000393448 RNF214Q8ND24 703 aa20.33■□□□□ 0.84
RUFY1-203ENST00000393448 SUGT1Q9Y2Z0 365 aa20.33■□□□□ 0.84
RUFY1-203ENST00000393448 FOCADQ5VW36 1801 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 TSPY3P0CV98 308 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 TSPY8P0CW00 308 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 RASA1P20936 1047 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 NASPP49321 788 aaPredicted RBP20.32■□□□□ 0.84
RUFY1-203ENST00000393448 DDX4Q9NQI0 724 aaKnown RBP20.32■□□□□ 0.84
RUFY1-203ENST00000393448 NR1I2O75469 434 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 DEXIO95424 95 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 CDK8P49336 464 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 FUT2Q10981 343 aa20.32■□□□□ 0.84
RUFY1-203ENST00000393448 GNL2Q13823 731 aaKnown RBP20.32■□□□□ 0.84
RUFY1-203ENST00000393448 ZNF444Q8N0Y2 327 aaPredicted RBP20.32■□□□□ 0.84
RUFY1-203ENST00000393448 DDAH1O94760 285 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 ATL3Q6DD88 541 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 FAM43AQ8N2R8 423 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 SHISA4Q96DD7 197 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 RTEL1Q9NZ71 1219 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 C10orf71Q711Q0 1435 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 SNED1Q8TER0 1413 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 WDHD1O75717 1129 aaPredicted RBP20.31■□□□□ 0.84
RUFY1-203ENST00000393448 ME1P48163 572 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 C16orf86Q6ZW13 317 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 WASF1Q92558 559 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 TSPY26PQ9H489 355 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 USP40Q9NVE5 1235 aa20.31■□□□□ 0.84
RUFY1-203ENST00000393448 V9GY48 417 aaPredicted RBP20.31■□□□□ 0.84
RUFY1-203ENST00000393448 APOBEC3HQ6NTF7 200 aaKnown RBP20.3■□□□□ 0.84
RUFY1-203ENST00000393448 MTMR7Q9Y216 660 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 UTRNP46939 3433 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 BTBD18B2RXH4 712 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 CALM1P0DP23 149 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 CALM2P0DP24 149 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 CALM3P0DP25 149 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 PPP2R5BQ15173 497 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 PKN1Q16512 942 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 DACT2Q5SW24 774 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 CDC42EP5Q6NZY7 148 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 SRBD1Q8N5C6 995 aaKnown RBP20.3■□□□□ 0.84
RUFY1-203ENST00000393448 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 TEKT1Q969V4 418 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.3■□□□□ 0.84
RUFY1-203ENST00000393448 RNF26Q9BY78 433 aaPredicted RBP20.3■□□□□ 0.84
RUFY1-203ENST00000393448 KAT14Q9H8E8 782 aa20.3■□□□□ 0.84
RUFY1-203ENST00000393448 MMP1P03956 469 aa20.29■□□□□ 0.84
RUFY1-203ENST00000393448 STK38Q15208 465 aa20.29■□□□□ 0.84
RUFY1-203ENST00000393448 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
RUFY1-203ENST00000393448 CTCFLQ8NI51 663 aaPredicted RBP20.29■□□□□ 0.84
RUFY1-203ENST00000393448 GOLPH3LQ9H4A5 285 aa20.29■□□□□ 0.84
RUFY1-203ENST00000393448 RBM28Q9NW13 759 aaKnown RBP20.29■□□□□ 0.84
RUFY1-203ENST00000393448 PCDHA7Q9UN72 937 aa20.29■□□□□ 0.84
RUFY1-203ENST00000393448 STX8Q9UNK0 236 aa20.29■□□□□ 0.84
RUFY1-203ENST00000393448 DPEP1P16444 411 aa20.28■□□□□ 0.84
RUFY1-203ENST00000393448 U2AF2P26368 475 aaKnown RBP eCLIP20.28■□□□□ 0.84
RUFY1-203ENST00000393448 CRKP46108 304 aa20.28■□□□□ 0.84
RUFY1-203ENST00000393448 STRIP1Q5VSL9 837 aa20.28■□□□□ 0.84
RUFY1-203ENST00000393448 CCAR1Q8IX12 1150 aaKnown RBP20.28■□□□□ 0.84
RUFY1-203ENST00000393448 NUP62CLQ9H1M0 184 aa20.28■□□□□ 0.84
RUFY1-203ENST00000393448 POLR3EQ9NVU0 708 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms