RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ADALQ6DHV7 355 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 CCDC73Q6ZRK6 1079 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 CCAR1Q8IX12 1150 aaKnown RBP23.26■■□□□ 1.31
PTPN11-202ENST00000392597 SH3RF3Q8TEJ3 882 aaPredicted RBP23.26■■□□□ 1.31
PTPN11-202ENST00000392597 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
PTPN11-202ENST00000392597 RNF26Q9BY78 433 aaPredicted RBP23.26■■□□□ 1.31
PTPN11-202ENST00000392597 C6orf229H3BNL8 230 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 PRDM1O75626 825 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 PLCG2P16885 1265 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 STK38Q15208 465 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 DIXDC1Q155Q3 683 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 AMOTL1Q8IY63 956 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 NUP133Q8WUM0 1156 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 GPR75-ASB3A0A0A6YYF3 556 aa23.25■■□□□ 1.31
PTPN11-202ENST00000392597 CTAGE5O15320 804 aa23.25■■□□□ 1.31
PTPN11-202ENST00000392597 ANO1Q5XXA6 986 aa23.25■■□□□ 1.31
PTPN11-202ENST00000392597 COA1Q9GZY4 146 aa23.25■■□□□ 1.31
PTPN11-202ENST00000392597 CLIC4Q9Y696 253 aa23.25■■□□□ 1.31
PTPN11-202ENST00000392597 CYP2D6P10635 497 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 FAM160A1Q05DH4 1040 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 GNL2Q13823 731 aaKnown RBP23.24■■□□□ 1.31
PTPN11-202ENST00000392597 HS1BP3Q53T59 392 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 PCDHA7Q9UN72 937 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 SUGT1Q9Y2Z0 365 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 MYH6P13533 1939 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 SPTLC2O15270 562 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 USP17L8P0C7I0 530 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 COL11A2P13942 1736 aaPredicted RBP23.24■■□□□ 1.31
PTPN11-202ENST00000392597 TROAPQ12815 778 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 SAFBQ15424 915 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTPN11-202ENST00000392597 CAMK4Q16566 473 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
PTPN11-202ENST00000392597 CDK5RAP2Q96SN8 1893 aa23.23■■□□□ 1.31
PTPN11-202ENST00000392597 SF3A1Q15459 793 aaKnown RBP23.23■■□□□ 1.31
PTPN11-202ENST00000392597 ENGASEQ8NFI3 743 aa23.23■■□□□ 1.31
PTPN11-202ENST00000392597 MASTLQ96GX5 879 aa23.23■■□□□ 1.31
PTPN11-202ENST00000392597 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.23■■□□□ 1.31
PTPN11-202ENST00000392597 GAKO14976 1311 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 MMP1P03956 469 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 CCDC178Q5BJE1 867 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 MRPS27Q92552 414 aaKnown RBP23.22■■□□□ 1.31
PTPN11-202ENST00000392597 GOLPH3LQ9H4A5 285 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 GOLGB1Q14789 3259 aaKnown RBP23.22■■□□□ 1.31
PTPN11-202ENST00000392597 GUCY1A2P33402 732 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 BTDP43251 543 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 EVX2Q03828 476 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 TYRO3Q06418 890 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 FUT2Q10981 343 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 SNW1Q13573 536 aaKnown RBP23.22■■□□□ 1.31
PTPN11-202ENST00000392597 SLC39A14Q15043 492 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 FSIP1Q8NA03 581 aa23.22■■□□□ 1.31
PTPN11-202ENST00000392597 DDX60LQ5H9U9 1706 aaKnown RBP23.21■■□□□ 1.31
PTPN11-202ENST00000392597 TSPY2A6NKD2 308 aa23.21■■□□□ 1.31
PTPN11-202ENST00000392597 AKAP17AQ02040 695 aaKnown RBP23.21■■□□□ 1.31
PTPN11-202ENST00000392597 MPNDQ8N594 471 aa23.21■■□□□ 1.31
PTPN11-202ENST00000392597 TGFBRAP1Q8WUH2 860 aa23.21■■□□□ 1.31
PTPN11-202ENST00000392597 FOXP1Q9H334 677 aaPredicted RBP23.21■■□□□ 1.31
PTPN11-202ENST00000392597 CD2APQ9Y5K6 639 aa23.21■■□□□ 1.31
PTPN11-202ENST00000392597 PRPF3O43395 683 aaKnown RBP23.2■■□□□ 1.3
PTPN11-202ENST00000392597 KINO60870 393 aaKnown RBP23.2■■□□□ 1.3
PTPN11-202ENST00000392597 NOSTRINQ8IVI9 506 aa23.2■■□□□ 1.3
PTPN11-202ENST00000392597 JMYQ8N9B5 988 aa23.2■■□□□ 1.3
PTPN11-202ENST00000392597 ANKS1AQ92625 1134 aa23.2■■□□□ 1.3
PTPN11-202ENST00000392597 TMX4Q9H1E5 349 aaPredicted RBP23.2■■□□□ 1.3
PTPN11-202ENST00000392597 PPP6R2O75170 966 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 XBP1P17861 261 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 FAM47AQ5JRC9 791 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 ZNF287Q9HBT7 754 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 UBE2Q2LH0YL09 131 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 CAVIN2O95810 425 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 TGFB2P61812 414 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 TMTC3Q6ZXV5 915 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 DGKHQ86XP1 1220 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 CKAP2LQ8IYA6 745 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 ZC3H12CQ9C0D7 883 aaKnown RBP23.19■■□□□ 1.3
PTPN11-202ENST00000392597 TCP11L1Q9NUJ3 509 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 MRVI1Q9Y6F6 885 aa23.19■■□□□ 1.3
PTPN11-202ENST00000392597 H0YIN7 160 aa23.18■■□□□ 1.3
PTPN11-202ENST00000392597 SASS6Q6UVJ0 657 aa23.18■■□□□ 1.3
PTPN11-202ENST00000392597 DPP8Q6V1X1 898 aaPredicted RBP23.18■■□□□ 1.3
PTPN11-202ENST00000392597 FMR1NBQ8N0W7 255 aaPredicted RBP23.18■■□□□ 1.3
PTPN11-202ENST00000392597 CTCFLQ8NI51 663 aaPredicted RBP23.18■■□□□ 1.3
PTPN11-202ENST00000392597 FAM200AQ8TCP9 573 aa23.18■■□□□ 1.3
PTPN11-202ENST00000392597 MAP3K14Q99558 947 aa23.18■■□□□ 1.3
PTPN11-202ENST00000392597 DIS3L2Q8IYB7 885 aaKnown RBP23.17■■□□□ 1.3
PTPN11-202ENST00000392597 TEX11Q8IYF3 940 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 FOCADQ5VW36 1801 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 CMA1P23946 247 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 RHBDL3P58872 404 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 PTPAQ15257 358 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 AXDND1Q5T1B0 1012 aaPredicted RBP23.17■■□□□ 1.3
PTPN11-202ENST00000392597 RCSD1Q6JBY9 416 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 CMTR1Q8N1G2 835 aaKnown RBP23.17■■□□□ 1.3
PTPN11-202ENST00000392597 CCDC82Q8N4S0 544 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 MKNK2Q9HBH9 465 aa23.17■■□□□ 1.3
PTPN11-202ENST00000392597 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.17■■□□□ 1.3
PTPN11-202ENST00000392597 ESPNB1AK53 854 aa23.16■■□□□ 1.3
PTPN11-202ENST00000392597 NMT2O60551 498 aa23.16■■□□□ 1.3
PTPN11-202ENST00000392597 GTF2IP78347 998 aa23.16■■□□□ 1.3
PTPN11-202ENST00000392597 TFAP4Q01664 338 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms