RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
BRF1-204ENST00000392557 CYP2D7A0A087X1C5 515 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 GOLGA8AA7E2F4 631 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 WDHD1O75717 1129 aaPredicted RBP12.4□□□□□ -0.42
BRF1-204ENST00000392557 ADGRA1Q86SQ6 560 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 KRT40Q6A162 431 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 DESI2Q9BSY9 194 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 ZSWIM5Q9P217 1185 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 HPS5Q9UPZ3 1129 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 AFF2P51816 1311 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 AKAP11Q9UKA4 1901 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 LAMA4Q16363 1823 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 MAGEB6P1A0A0J9YX57 407 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 ZBTB43O43298 467 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 CMA1P23946 247 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 KIF23Q02241 960 aaPredicted RBP12.4□□□□□ -0.42
BRF1-204ENST00000392557 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 TIGD1Q96MW7 591 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 GPR101Q96P66 508 aaPredicted RBP12.4□□□□□ -0.42
BRF1-204ENST00000392557 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
BRF1-204ENST00000392557 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
BRF1-204ENST00000392557 SLC12A7Q9Y666 1083 aa12.4□□□□□ -0.42
BRF1-204ENST00000392557 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 CDKL5O76039 1030 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 TICAM2Q86XR7 235 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
BRF1-204ENST00000392557 GJD4Q96KN9 370 aaPredicted RBP12.39□□□□□ -0.43
BRF1-204ENST00000392557 LZTFL1Q9NQ48 299 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
BRF1-204ENST00000392557 PES1O00541 588 aaKnown RBP12.39□□□□□ -0.43
BRF1-204ENST00000392557 SEPT12Q8IYM1 358 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
BRF1-204ENST00000392557 CCDC12Q8WUD4 166 aaPredicted RBP12.39□□□□□ -0.43
BRF1-204ENST00000392557 ERICH2A1L162 156 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 HSPA1LP34931 641 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 BAG1Q99933 345 aaPredicted RBP12.39□□□□□ -0.43
BRF1-204ENST00000392557 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 KCNH3Q9ULD8 1083 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 PCDHA5Q9Y5H7 936 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
BRF1-204ENST00000392557 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
BRF1-204ENST00000392557 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
BRF1-204ENST00000392557 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 NEK11Q8NG66 645 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
BRF1-204ENST00000392557 ZCCHC17Q9NP64 241 aaKnown RBP12.38□□□□□ -0.43
BRF1-204ENST00000392557 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
BRF1-204ENST00000392557 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
BRF1-204ENST00000392557 CDC27P30260 824 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 STX17P56962 302 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 LONRF3Q496Y0 759 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 AATFQ9NY61 560 aaKnown RBP eCLIP12.38□□□□□ -0.43
BRF1-204ENST00000392557 MROH7-TTC4A0A0A0MT08 1334 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 FOXN1O15353 648 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 UBE4AQ14139 1066 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 SLC39A14Q15043 492 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 UBAC1Q9BSL1 405 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 NFE2L3Q9Y4A8 694 aa12.38□□□□□ -0.43
BRF1-204ENST00000392557 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 SART3Q15020 963 aaKnown RBP12.37□□□□□ -0.43
BRF1-204ENST00000392557 CALCOCO1Q9P1Z2 691 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 PUF60Q9UHX1 559 aaKnown RBP12.37□□□□□ -0.43
BRF1-204ENST00000392557 KCNJ14Q9UNX9 436 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
BRF1-204ENST00000392557 POLR2DO15514 142 aaKnown RBP12.37□□□□□ -0.43
BRF1-204ENST00000392557 COL4A1P02462 1669 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
BRF1-204ENST00000392557 GPS2Q13227 327 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 DHX8Q14562 1220 aaKnown RBP12.37□□□□□ -0.43
BRF1-204ENST00000392557 SKIDA1Q1XH10 827 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 PPP2R2CQ9Y2T4 447 aa12.37□□□□□ -0.43
BRF1-204ENST00000392557 PRDX5P30044 214 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 AFMP43652 599 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 WTAPQ15007 396 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 CNBD1Q8NA66 436 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
BRF1-204ENST00000392557 MYH7P12883 1935 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 PPARAQ07869 468 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 MCM6Q14566 821 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 PPFIBP1Q86W92 1011 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 SALL1Q9NSC2 1324 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 NWD2Q9ULI1 1742 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 TNNT3P45378 269 aaPredicted RBP12.36□□□□□ -0.43
BRF1-204ENST00000392557 GYS2P54840 703 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
BRF1-204ENST00000392557 PPP2R3AQ06190 1150 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms