RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 ATP5JP18859 108 aa16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 TREML2Q5T2D2 321 aa16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 MIGA1Q8NAN2 632 aa16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 GTF3C2Q8WUA4 911 aaPredicted RBP16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 CRNKL1Q9BZJ0 848 aaKnown RBP16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 LOC285556D6RIA3 1793 aa16.48■□□□□ 0.23
TRBV4-1-201ENST00000390357 SIPA1L1O43166 1804 aa16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 APBB1O00213 710 aa16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 CCDC84Q86UT8 332 aaPredicted RBP16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 LRRCC1Q9C099 1032 aa16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 ASCC2Q9H1I8 757 aaPredicted RBP16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 BIN2Q9UBW5 565 aaPredicted RBP16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 SAP30BPQ9UHR5 308 aaKnown RBP16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
TRBV4-1-201ENST00000390357 POLR3DP05423 398 aaPredicted RBP16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 GJB1P08034 283 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 PDE6AP16499 860 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 USP14P54578 494 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 IRX3P78415 501 aaPredicted RBP16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 PRKCZQ05513 592 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 CERKLQ49MI3 558 aaPredicted RBP16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 ZSCAN25Q6NSZ9 544 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 PAG1Q9NWQ8 432 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 NDUFB9Q9Y6M9 179 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 ZSWIM8A7E2V4 1837 aa16.46■□□□□ 0.23
TRBV4-1-201ENST00000390357 GOLIM4O00461 696 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 ADCY3O60266 1144 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 GJA8P48165 433 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 FLT3LGP49771 235 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 MTMR2Q13614 643 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 HAUS7Q99871 368 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 ATP8A2Q9NTI2 1148 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
TRBV4-1-201ENST00000390357 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
TRBV4-1-201ENST00000390357 ABCB5Q2M3G0 1257 aa16.44■□□□□ 0.22
TRBV4-1-201ENST00000390357 C12orf42Q96LP6 360 aa16.44■□□□□ 0.22
TRBV4-1-201ENST00000390357 RNF208Q9H0X6 261 aa16.44■□□□□ 0.22
TRBV4-1-201ENST00000390357 BOLA2Q9H3K6 86 aa16.44■□□□□ 0.22
TRBV4-1-201ENST00000390357 GABRQQ9UN88 632 aa16.44■□□□□ 0.22
TRBV4-1-201ENST00000390357 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 GDF11O95390 407 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 GH2P01242 217 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 CCL5P13501 91 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 UBE3CQ15386 1083 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 AMOTL1Q8IY63 956 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 DDRGK1Q96HY6 314 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 DCTPP1Q9H773 170 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 MCM9Q9NXL9 1143 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 SWAP70Q9UH65 585 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 DOCK3Q8IZD9 2030 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 HTTP42858 3142 aa16.43■□□□□ 0.22
TRBV4-1-201ENST00000390357 SLC34A2O95436 690 aa16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 ADD2P35612 726 aa16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 PLCD1P51178 756 aa16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 JAG1P78504 1218 aa16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 GABPAQ06546 454 aa16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 MTFR1Q15390 333 aa16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 P2RX7Q99572 595 aaKnown RBP16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
TRBV4-1-201ENST00000390357 CENPFP49454 3210 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 SGPL1O95470 568 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 MYCP01106 439 aaPredicted RBP16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 MAPK4P31152 587 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 HERVK_113P62684 666 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 TRMT44Q8IYL2 757 aaKnown RBP16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 DCP1AQ9NPI6 582 aaPredicted RBP16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 EMILIN3Q9NT22 766 aa16.41■□□□□ 0.22
TRBV4-1-201ENST00000390357 SHMT1P34896 483 aa16.4■□□□□ 0.22
TRBV4-1-201ENST00000390357 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
TRBV4-1-201ENST00000390357 FEZ1Q99689 392 aa16.4■□□□□ 0.22
TRBV4-1-201ENST00000390357 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
TRBV4-1-201ENST00000390357 GJD2Q9UKL4 321 aa16.4■□□□□ 0.22
TRBV4-1-201ENST00000390357 XRCC5P13010 732 aaKnown RBP16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 CCNA1P78396 465 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 LRRFIP1Q32MZ4 808 aaKnown RBP16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 CATSPERGQ6ZRH7 1159 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 SOCS4Q8WXH5 440 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms