RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 SMCO2A6NFE2 343 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 EPB41P11171 864 aaKnown RBP11.55□□□□□ -0.56
PKP4-201ENST00000389757 ALAS1P13196 640 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 ARID5AQ03989 594 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 UBXN1Q04323 297 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 IFFO1Q0D2I5 559 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 SNW1Q13573 536 aaKnown RBP11.55□□□□□ -0.56
PKP4-201ENST00000389757 MCTP2Q6DN12 878 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 CNNM4Q6P4Q7 775 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 TMCO3Q6UWJ1 677 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 LRRC47Q8N1G4 583 aaKnown RBP11.55□□□□□ -0.56
PKP4-201ENST00000389757 TNKSO95271 1327 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 CUTAO60888 179 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 PRPHP41219 470 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 DCAF17Q5H9S7 520 aaPredicted RBP11.55□□□□□ -0.56
PKP4-201ENST00000389757 KCNJ14Q9UNX9 436 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 MRPL11Q9Y3B7 192 aaKnown RBP11.55□□□□□ -0.56
PKP4-201ENST00000389757 DNM2P50570 870 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 SUPT20HL1Q3ZLR7 823 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 CEP135Q66GS9 1140 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 CSRNP1Q96S65 589 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 VPS54Q9P1Q0 977 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 DNM3Q9UQ16 869 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 FGAP02671 866 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 ADRA2BP18089 450 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 GNG11P61952 73 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 HLTFQ14527 1009 aaKnown RBP eCLIP11.55□□□□□ -0.561e-6■■□□□ 11.4
PKP4-201ENST00000389757 TTC16Q8NEE8 873 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 CCDC113Q9H0I3 377 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 NARFQ9UHQ1 456 aa11.55□□□□□ -0.56
PKP4-201ENST00000389757 RGS22Q8NE09 1264 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 GOLGA6L10A0A0M3HER8 536 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 RAD17O75943 681 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 SLFN13Q68D06 897 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 ZNF354CQ86Y25 554 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 UNC13BO14795 1591 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 FRMPD2Q68DX3 1309 aaPredicted RBP11.54□□□□□ -0.56
PKP4-201ENST00000389757 WDR44Q5JSH3 913 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 FMNL3Q8IVF7 1028 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 SSH2Q76I76 1423 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 FLOT1O75955 427 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 SLC27A3Q5K4L6 730 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 GLI2P10070 1586 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 M0QZ92 97 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 PTGS1P23219 599 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 ARHGEF16Q5VV41 709 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 LRRC45Q96CN5 670 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 ZNF274Q96GC6 653 aaPredicted RBP11.54□□□□□ -0.56
PKP4-201ENST00000389757 CCDC42Q96M95 316 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 TRIM6Q9C030 488 aaPredicted RBP11.54□□□□□ -0.56
PKP4-201ENST00000389757 PIM2Q9P1W9 311 aa11.54□□□□□ -0.56
PKP4-201ENST00000389757 KLRF2D3W0D1 207 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 LMAN1P49257 510 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 MCF2L2Q86YR7 1114 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 PTH1RQ03431 593 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 KIAA0753Q2KHM9 967 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 CIAPIN1Q6FI81 312 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 GLG1Q92896 1179 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 PSTPIP2Q9H939 334 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
PKP4-201ENST00000389757 GCOM1H8Y6P7 765 aaPredicted RBP11.53□□□□□ -0.56
PKP4-201ENST00000389757 POLR2MP0CAP2 368 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
PKP4-201ENST00000389757 FBXO11Q86XK2 927 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 DYDC1Q8WWB3 177 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 CRB1P82279 1406 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 GAS7O60861 476 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 GSPT1P15170 499 aaKnown RBP11.53□□□□□ -0.56
PKP4-201ENST00000389757 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 TRMT2AQ8IZ69 625 aaKnown RBP11.53□□□□□ -0.56
PKP4-201ENST00000389757 LMBR1Q8WVP7 490 aa11.53□□□□□ -0.56
PKP4-201ENST00000389757 CALUO43852 315 aaPredicted RBP11.52□□□□□ -0.56
PKP4-201ENST00000389757 DDAH1O94760 285 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 RIMBP3CA6NJZ7 1639 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 RIMBP3BA6NNM3 1639 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 RIMBP3Q9UFD9 1639 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.56
PKP4-201ENST00000389757 TMEM232C9JQI7 657 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 KRT83P78385 493 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 MAEAQ7L5Y9 396 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 MLXIPQ9HAP2 919 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 COMMD10Q9Y6G5 202 aa11.52□□□□□ -0.56
PKP4-201ENST00000389757 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.57
PKP4-201ENST00000389757 USP17L3A6NCW0 530 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 USP17L4A6NCW7 530 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 POLR2DO15514 142 aaKnown RBP11.52□□□□□ -0.57
PKP4-201ENST00000389757 JAK2O60674 1132 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 EEF2P13639 858 aaKnown RBP11.52□□□□□ -0.57
PKP4-201ENST00000389757 MYL5Q02045 173 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 USP17L1Q7RTZ2 530 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 COA1Q9GZY4 146 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 STAP2Q9UGK3 403 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 MED23Q9ULK4 1368 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 C1orf167Q5SNV9 1468 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms