RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 CTAGE4Q8IX94 777 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 ADPGKQ9BRR6 497 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 SUGCTQ9HAC7 445 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 DCUN1D2Q6PH85 259 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 JAKMIP2Q96AA8 810 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 CRKLP46109 303 aaKnown RBP16.59■□□□□ 0.25
LRRK1-201ENST00000388948 IFRD2Q12894 506 aaPredicted RBP16.59■□□□□ 0.25
LRRK1-201ENST00000388948 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 CAPZA3Q96KX2 299 aa16.59■□□□□ 0.25
LRRK1-201ENST00000388948 SMIM23A6NLE4 172 aa16.58■□□□□ 0.25
LRRK1-201ENST00000388948 PHKG2P15735 406 aa16.58■□□□□ 0.25
LRRK1-201ENST00000388948 TMOD1P28289 359 aa16.58■□□□□ 0.25
LRRK1-201ENST00000388948 UAP1Q16222 522 aaPredicted RBP16.58■□□□□ 0.25
LRRK1-201ENST00000388948 ZBTB8OSQ8IWT0 167 aa16.58■□□□□ 0.25
LRRK1-201ENST00000388948 GABPB2Q8TAK5 448 aaPredicted RBP16.58■□□□□ 0.25
LRRK1-201ENST00000388948 MRPL11Q9Y3B7 192 aaKnown RBP16.58■□□□□ 0.25
LRRK1-201ENST00000388948 CFAP157Q5JU67 520 aa16.58■□□□□ 0.25
LRRK1-201ENST00000388948 hCG_1642624A0A1W2PR95 340 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 RIOK3O14730 519 aaKnown RBP16.58■□□□□ 0.24
LRRK1-201ENST00000388948 FAM102BQ5T8I3 360 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 CSRNP2Q9H175 543 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 KCNG1Q9UIX4 513 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 ERCC5P28715 1186 aaPredicted RBP16.58■□□□□ 0.24
LRRK1-201ENST00000388948 IRX5P78411 483 aaPredicted RBP16.58■□□□□ 0.24
LRRK1-201ENST00000388948 USP19O94966 1318 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 ICA1Q05084 483 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 DYMQ7RTS9 669 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 STMN4Q9H169 189 aaPredicted RBP16.58■□□□□ 0.24
LRRK1-201ENST00000388948 USP17L12C9JPN9 530 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 USP17L21D6R901 530 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 LTKP29376 864 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 STIM2Q9P246 746 aa16.58■□□□□ 0.24
LRRK1-201ENST00000388948 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 LRRC47Q8N1G4 583 aaKnown RBP16.57■□□□□ 0.24
LRRK1-201ENST00000388948 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 KBTBD3Q8NAB2 608 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 A0A1B0GVL5 298 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 SERPINB2P05120 415 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 MCF2L2Q86YR7 1114 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 NOC2LQ9Y3T9 749 aaKnown RBP16.57■□□□□ 0.24
LRRK1-201ENST00000388948 SKILP12757 684 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 CPA1P15085 419 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 BTDP43251 543 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 ZSCAN23Q3MJ62 389 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 ELP1O95163 1332 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 CALCOCO2Q13137 446 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 POLR2MP0CAP2 368 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 Q3C1V9 767 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
LRRK1-201ENST00000388948 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.56■□□□□ 0.24
LRRK1-201ENST00000388948 GIPC1O14908 333 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
LRRK1-201ENST00000388948 PPANQ9NQ55 473 aaKnown RBP16.56■□□□□ 0.24
LRRK1-201ENST00000388948 TBC1D8BQ0IIM8 1120 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 DNAI1Q9UI46 699 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 ZBTB38Q8NAP3 1195 aaPredicted RBP16.56■□□□□ 0.24
LRRK1-201ENST00000388948 PHKBQ93100 1093 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 MTRF1LQ9UGC7 380 aaKnown RBP16.56■□□□□ 0.24
LRRK1-201ENST00000388948 SLC27A2O14975 620 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 RAD17O75943 681 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 BCAMP50895 628 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 RPS6KC1Q96S38 1066 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 CCPG1Q9ULG6 757 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 LRFN2Q9ULH4 789 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 ABCB5Q2M3G0 1257 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 DBNDD1Q9H9R9 158 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 FAM227BQ96M60 508 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 USTQ9Y2C2 406 aa16.56■□□□□ 0.24
LRRK1-201ENST00000388948 SMCO2A6NFE2 343 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 KCNQ4P56696 695 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 DIS3L2Q8IYB7 885 aaKnown RBP16.55■□□□□ 0.24
LRRK1-201ENST00000388948 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 ST7Q9NRC1 585 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 PPARAQ07869 468 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 NSRP1Q9H0G5 558 aaKnown RBP16.55■□□□□ 0.24
LRRK1-201ENST00000388948 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
LRRK1-201ENST00000388948 POLR2DO15514 142 aaKnown RBP16.55■□□□□ 0.24
LRRK1-201ENST00000388948 OATP04181 439 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 CCDC6Q16204 474 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 RDH13Q8NBN7 331 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 ATP2C2O75185 946 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 RSPH3Q86UC2 560 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
LRRK1-201ENST00000388948 SMC6Q96SB8 1091 aa16.54■□□□□ 0.24
LRRK1-201ENST00000388948 SELENOSQ9BQE4 189 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms