RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 MAN1A1P33908 653 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 PIP4K2AP48426 406 aaPredicted RBP6.98□□□□□ -1.29
MSR1-204ENST00000381998 ZNF165P49910 485 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 NCBP1Q09161 790 aaKnown RBP6.98□□□□□ -1.29
MSR1-204ENST00000381998 G3BP1Q13283 466 aaKnown RBP eCLIP6.98□□□□□ -1.29
MSR1-204ENST00000381998 ELOAQ14241 798 aaKnown RBP6.98□□□□□ -1.29
MSR1-204ENST00000381998 EPHA10Q5JZY3 1008 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 RNF20Q5VTR2 975 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 SCUBE3Q8IX30 993 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 DRC7Q8IY82 874 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 CCDC144CPQ8IYA2 1237 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 ALG2Q9H553 416 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 DDX19AQ9NUU7 478 aaKnown RBP6.98□□□□□ -1.29
MSR1-204ENST00000381998 ABCC6O95255 1503 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 SCN11AQ9UI33 1791 aa6.98□□□□□ -1.29
MSR1-204ENST00000381998 TAF5LO75529 589 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 SNRPA1P09661 255 aaKnown RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 DNAJA1P31689 397 aaKnown RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 USP46P62068 366 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 POU5F1BQ06416 359 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 GCKRQ14397 625 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 SETDB1Q15047 1291 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 ANKRD1Q15327 319 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 NBPF20Q3BBV1 942 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 ODR4Q5SWX8 454 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 ANKK1Q8NFD2 765 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 TDRD7Q8NHU6 1098 aaKnown RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 BICD2Q8TD16 824 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 CACTINQ8WUQ7 758 aaKnown RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 MYD88Q99836 296 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 METTL22Q9BUU2 404 aaPredicted RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 JCADQ9P266 1359 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 LDHAP00338 332 aaKnown RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 PTPN5P54829 565 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 NAA30Q147X3 362 aaPredicted RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 UTP14CQ5TAP6 766 aaKnown RBP6.97□□□□□ -1.29
MSR1-204ENST00000381998 BRF1Q92994 677 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 GTF3C6Q969F1 213 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 TGIF2Q9GZN2 237 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 CCSER2Q9H7U1 834 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 KLF15Q9UIH9 416 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 MRC1P22897 1456 aa6.97□□□□□ -1.29
MSR1-204ENST00000381998 A0A087WWV3 80 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 FGAP02671 866 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 GTF2E1P29083 439 aaPredicted RBP6.96□□□□□ -1.29
MSR1-204ENST00000381998 HSPA2P54652 639 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 CEBPZQ03701 1054 aaKnown RBP6.96□□□□□ -1.29
MSR1-204ENST00000381998 NEXNQ0ZGT2 675 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 RESTQ13127 1097 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 ARID5BQ14865 1188 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 TSGA10IPQ3SY00 556 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 PRPF38BQ5VTL8 546 aaKnown RBP6.96□□□□□ -1.29
MSR1-204ENST00000381998 TTC39BQ5VTQ0 682 aaPredicted RBP6.96□□□□□ -1.29
MSR1-204ENST00000381998 CCSAPQ6IQ19 270 aaPredicted RBP6.96□□□□□ -1.29
MSR1-204ENST00000381998 DDX46Q7L014 1031 aaKnown RBP6.96□□□□□ -1.29
MSR1-204ENST00000381998 TTC5Q8N0Z6 440 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 LRRC2Q9BYS8 371 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 FTOQ9C0B1 505 aaKnown RBP eCLIP6.96□□□□□ -1.29
MSR1-204ENST00000381998 ALDH8A1Q9H2A2 487 aaPredicted RBP6.96□□□□□ -1.29
MSR1-204ENST00000381998 SLAIN2Q9P270 581 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 CLIP2Q9UDT6 1046 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 CPDO75976 1380 aa6.96□□□□□ -1.29
MSR1-204ENST00000381998 PLEKHG2Q9H7P9 1386 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 ACTN4O43707 911 aaKnown RBP6.96□□□□□ -1.3
MSR1-204ENST00000381998 VDRP11473 427 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 CABP4P57796 275 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 AMPD3Q01432 767 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 TUSC1Q2TAM9 212 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 USPL1Q5W0Q7 1092 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 CCDC129Q6ZRS4 1044 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 C11orf57Q6ZUT1 292 aaPredicted RBP6.96□□□□□ -1.3
MSR1-204ENST00000381998 ENOX1Q8TC92 643 aaKnown RBP6.96□□□□□ -1.3
MSR1-204ENST00000381998 MKL1Q969V6 931 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 FMNL2Q96PY5 1086 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 SEC62Q99442 399 aaKnown RBP6.96□□□□□ -1.3
MSR1-204ENST00000381998 RSPH9Q9H1X1 276 aaPredicted RBP6.96□□□□□ -1.3
MSR1-204ENST00000381998 HMG20BQ9P0W2 317 aa6.96□□□□□ -1.3
MSR1-204ENST00000381998 TNNT1P13805 278 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 VAC14Q08AM6 782 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 SOGA3Q5TF21 947 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 MSL3Q8N5Y2 521 aaKnown RBP6.95□□□□□ -1.3
MSR1-204ENST00000381998 SLC39A13Q96H72 371 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 DBNLQ9UJU6 430 aaKnown RBP6.95□□□□□ -1.3
MSR1-204ENST00000381998 USP27XA6NNY8 438 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 SMTNL1A8MU46 457 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 PPFIA3O75145 1194 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 CYP21A2P08686 494 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 SCP2P22307 547 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 ADD1P35611 737 aaKnown RBP6.95□□□□□ -1.3
MSR1-204ENST00000381998 RFX5P48382 616 aaPredicted RBP6.95□□□□□ -1.3
MSR1-204ENST00000381998 RASSF7Q02833 373 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 SCRN1Q12765 414 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 IQCB1Q15051 598 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 Q6ZUG5 572 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 BRINP3Q76B58 766 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.95□□□□□ -1.3
MSR1-204ENST00000381998 ATL2Q8NHH9 583 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 NEK1Q96PY6 1258 aa6.95□□□□□ -1.3
MSR1-204ENST00000381998 MPHOSPH6Q99547 160 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms