RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 CREB3L3Q68CJ9 461 aa18.35■□□□□ 0.53
PDGFB-202ENST00000381551 SCYL3Q8IZE3 742 aa18.35■□□□□ 0.53
PDGFB-202ENST00000381551 ZNF444Q8N0Y2 327 aaPredicted RBP18.35■□□□□ 0.53
PDGFB-202ENST00000381551 STAG1Q8WVM7 1258 aa18.35■□□□□ 0.53
PDGFB-202ENST00000381551 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
PDGFB-202ENST00000381551 CCDC17Q96LX7 622 aa18.35■□□□□ 0.53
PDGFB-202ENST00000381551 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
PDGFB-202ENST00000381551 CSADQ9Y600 493 aa18.35■□□□□ 0.53
PDGFB-202ENST00000381551 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
PDGFB-202ENST00000381551 SLC27A2O14975 620 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 ORC4O43929 436 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 GDF11O95390 407 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 AKR1B1P15121 316 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 HSPA4P34932 840 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 ABCB5Q2M3G0 1257 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 SHROOM1Q2M3G4 852 aaPredicted RBP18.34■□□□□ 0.53
PDGFB-202ENST00000381551 RGMBQ6NW40 437 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 ELP3Q9H9T3 547 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 GINM1Q9NU53 330 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 TAF6LQ9Y6J9 622 aa18.34■□□□□ 0.53
PDGFB-202ENST00000381551 LAMB1P07942 1786 aa18.33■□□□□ 0.53
PDGFB-202ENST00000381551 GH2P01242 217 aa18.33■□□□□ 0.52
PDGFB-202ENST00000381551 ASNSP08243 561 aa18.33■□□□□ 0.52
PDGFB-202ENST00000381551 DEFB115Q30KQ5 88 aa18.33■□□□□ 0.52
PDGFB-202ENST00000381551 KCNB2Q92953 911 aa18.33■□□□□ 0.52
PDGFB-202ENST00000381551 RASSF10A6NK89 507 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 E7EWF7 191 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 PTPRAP18433 802 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 ZNF157P51786 506 aaPredicted RBP18.32■□□□□ 0.52
PDGFB-202ENST00000381551 HTRA3P83110 453 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 TFAP4Q01664 338 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 RNF20Q5VTR2 975 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDGFB-202ENST00000381551 CABP5Q9NP86 173 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 PICK1Q9NRD5 415 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.32■□□□□ 0.52
PDGFB-202ENST00000381551 ZBTB21Q9ULJ3 1066 aa18.32■□□□□ 0.52
PDGFB-202ENST00000381551 SPDYE5A6NIY4 337 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 MPHOSPH10O00566 681 aaKnown RBP18.31■□□□□ 0.52
PDGFB-202ENST00000381551 RANBP6O60518 1105 aaKnown RBP18.31■□□□□ 0.52
PDGFB-202ENST00000381551 PPATQ06203 517 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 FAM47AQ5JRC9 791 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 RRP12Q5JTH9 1297 aaKnown RBP18.31■□□□□ 0.52
PDGFB-202ENST00000381551 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 TMEM179Q6ZVK1 233 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 ERO1BQ86YB8 467 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 NEDD1Q8NHV4 660 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.31■□□□□ 0.52
PDGFB-202ENST00000381551 ZHX2Q9Y6X8 837 aa18.31■□□□□ 0.52
PDGFB-202ENST00000381551 NEDD4P46934 1319 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 NT5C2P49902 561 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 SEPT2Q15019 361 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 CCDC102AQ96A19 550 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 OPTNQ96CV9 577 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 KRT23Q9C075 422 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 CNNM2Q9H8M5 875 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 OTOFQ9HC10 1997 aa18.3■□□□□ 0.52
PDGFB-202ENST00000381551 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 FAM155AB1AL88 458 aaPredicted RBP18.29■□□□□ 0.52
PDGFB-202ENST00000381551 B4E1Z4 1266 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 TSPY3P0CV98 308 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 TSPY8P0CW00 308 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 ZKSCAN1P17029 563 aaPredicted RBP18.29■□□□□ 0.52
PDGFB-202ENST00000381551 GJA5P36382 358 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 SPRYD7Q5W111 196 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 CCDC84Q86UT8 332 aaPredicted RBP18.29■□□□□ 0.52
PDGFB-202ENST00000381551 SIAH1Q8IUQ4 282 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 ESR2Q92731 530 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 WNK4Q96J92 1243 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 BACH2Q9BYV9 841 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 KANSL2Q9H9L4 492 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 AFG3L2Q9Y4W6 797 aa18.29■□□□□ 0.52
PDGFB-202ENST00000381551 MYH8P13535 1937 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 TSPY2A6NKD2 308 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 IRF6O14896 467 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 KDM4AO75164 1064 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 TRDNQ13061 729 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 CYP4F22Q6NT55 531 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 RASAL3Q86YV0 1011 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 OTUD5Q96G74 571 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 WDR18Q9BV38 432 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
PDGFB-202ENST00000381551 SLC10A3P09131 477 aa18.27■□□□□ 0.52
PDGFB-202ENST00000381551 ZBTB48P10074 688 aaPredicted RBP18.27■□□□□ 0.52
PDGFB-202ENST00000381551 PPIL2Q13356 520 aa18.27■□□□□ 0.52
PDGFB-202ENST00000381551 ZNF280CQ8ND82 737 aa18.27■□□□□ 0.52
PDGFB-202ENST00000381551 TBC1D2Q9BYX2 928 aa18.27■□□□□ 0.52
PDGFB-202ENST00000381551 TCP11L1Q9NUJ3 509 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms