RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 DZIP3Q86Y13 1208 aaKnown RBP15.76■□□□□ 0.11
SDC1-202ENST00000381150 RIN2Q8WYP3 895 aaPredicted RBP15.76■□□□□ 0.11
SDC1-202ENST00000381150 SAMSN1Q9NSI8 373 aaKnown RBP15.76■□□□□ 0.11
SDC1-202ENST00000381150 CCDC151A5D8V7 595 aa15.76■□□□□ 0.11
SDC1-202ENST00000381150 CDC27P30260 824 aa15.76■□□□□ 0.11
SDC1-202ENST00000381150 NOP2P46087 812 aaKnown RBP15.76■□□□□ 0.11
SDC1-202ENST00000381150 TTC19Q6DKK2 380 aaPredicted RBP15.76■□□□□ 0.11
SDC1-202ENST00000381150 LIG3P49916 1009 aa15.76■□□□□ 0.11
SDC1-202ENST00000381150 NFXL1Q6ZNB6 911 aa15.76■□□□□ 0.11
SDC1-202ENST00000381150 CAPZA3Q96KX2 299 aa15.76■□□□□ 0.11
SDC1-202ENST00000381150 A0A1W2PQ27 194 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 A0A1W2PQ64 194 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 A0A1W2PQD8 194 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 ATP8B1O43520 1251 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 PRC1O43663 620 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 VSNL1P62760 191 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
SDC1-202ENST00000381150 SPECC1LQ69YQ0 1117 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
SDC1-202ENST00000381150 ALG1Q9BT22 464 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 MYL10Q9BUA6 226 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 NRAPQ86VF7 1730 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 FGFR2P21802 821 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 HOOK1Q9UJC3 728 aaKnown RBP15.75■□□□□ 0.11
SDC1-202ENST00000381150 RREB1Q92766 1687 aa15.75■□□□□ 0.11
SDC1-202ENST00000381150 ADD2P35612 726 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 MNAT1P51948 309 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 SRGAP1Q7Z6B7 1085 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 MB21D2Q8IYB1 491 aaPredicted RBP15.74■□□□□ 0.11
SDC1-202ENST00000381150 ARAP2Q8WZ64 1704 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 AFMP43652 599 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 TRIM29Q14134 588 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 CASP8Q14790 479 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 NBPF3Q9H094 633 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 ATRNO75882 1429 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 GPAA1O43292 621 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 CMA1P23946 247 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 ARID4AP29374 1257 aaPredicted RBP15.74■□□□□ 0.11
SDC1-202ENST00000381150 ANTXR2P58335 489 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 NCAPH2Q6IBW4 605 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 ACRBPQ8NEB7 543 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 SMARCC1Q92922 1105 aaPredicted RBP15.74■□□□□ 0.11
SDC1-202ENST00000381150 PIH1D3Q9NQM4 214 aaKnown RBP15.74■□□□□ 0.11
SDC1-202ENST00000381150 CNNM1Q9NRU3 951 aa15.74■□□□□ 0.11
SDC1-202ENST00000381150 MYH14Q7Z406 1995 aaKnown RBP15.74■□□□□ 0.11
SDC1-202ENST00000381150 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 CTAGE15A4D2H0 777 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 GOLGA6L9A6NEM1 432 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 ENC1O14682 589 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 CUTAO60888 179 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 CTAGE8P0CG41 777 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 CCT6AP40227 531 aaKnown RBP15.73■□□□□ 0.11
SDC1-202ENST00000381150 TRDNQ13061 729 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 CTAGE6Q86UF2 777 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 CTAGE4Q8IX94 777 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 SLC35F6Q8N357 371 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 KCNH3Q9ULD8 1083 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 IKBKBO14920 756 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 YEATS4O95619 227 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 BRD3Q15059 726 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 IMMTQ16891 758 aaKnown RBP15.73■□□□□ 0.11
SDC1-202ENST00000381150 SUSD4Q5VX71 490 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 ATL3Q6DD88 541 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 VPS37DQ86XT2 251 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 NKX2-3Q8TAU0 364 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 HSD3B7Q9H2F3 369 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 KCND1Q9NSA2 647 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 INTS13Q9NVM9 706 aa15.73■□□□□ 0.11
SDC1-202ENST00000381150 CTAGE9A4FU28 777 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 UBE2Q2LH0YL09 131 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 POLR2DO15514 142 aaKnown RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 TEX33O43247 280 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 PHKA1P46020 1223 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 SHC4Q6S5L8 630 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 RSRC2Q7L4I2 434 aaKnown RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 GSPT2Q8IYD1 628 aaKnown RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 JMYQ8N9B5 988 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 IGSF22Q8N9C0 903 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 TC2NQ8N9U0 490 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 HPS5Q9UPZ3 1129 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 CASP1P29466 404 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
SDC1-202ENST00000381150 STAMQ92783 540 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 GUCA1BQ9UMX6 200 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 TCRBV5S4A2TA0A5A2 114 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 AKR1B15C9JRZ8 316 aaPredicted RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 STX10O60499 249 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 MRPS25P82663 173 aaKnown RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 BEND6Q5SZJ8 279 aaPredicted RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 FOXP4Q8IVH2 680 aaPredicted RBP15.72■□□□□ 0.11
SDC1-202ENST00000381150 ANKZF1Q9H8Y5 726 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 POLD4Q9HCU8 107 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
SDC1-202ENST00000381150 ABL1P00519 1130 aa15.71■□□□□ 0.11
SDC1-202ENST00000381150 MAGEA9P43362 315 aa15.71■□□□□ 0.11
SDC1-202ENST00000381150 UBE3CQ15386 1083 aa15.71■□□□□ 0.11
SDC1-202ENST00000381150 SMYD4Q8IYR2 804 aaPredicted RBP15.71■□□□□ 0.11
SDC1-202ENST00000381150 PHLPP1O60346 1717 aa15.71■□□□□ 0.11
SDC1-202ENST00000381150 SRCAPQ6ZRS2 3230 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms