RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 JAG1P78504 1218 aa23.17■■□□□ 1.3
GTF3A-201ENST00000381140 CCL15Q16663 113 aa23.17■■□□□ 1.3
GTF3A-201ENST00000381140 VPS53Q5VIR6 699 aa23.17■■□□□ 1.3
GTF3A-201ENST00000381140 GIMAP6Q6P9H5 292 aa23.17■■□□□ 1.3
GTF3A-201ENST00000381140 ZNF589Q86UQ0 364 aaPredicted RBP23.17■■□□□ 1.3
GTF3A-201ENST00000381140 NAPBQ9H115 298 aa23.17■■□□□ 1.3
GTF3A-201ENST00000381140 CCDC171Q6TFL3 1326 aa23.16■■□□□ 1.3
GTF3A-201ENST00000381140 TRPA1O75762 1119 aa23.16■■□□□ 1.3
GTF3A-201ENST00000381140 SHMT1P34896 483 aa23.16■■□□□ 1.3
GTF3A-201ENST00000381140 TM4SF4P48230 202 aa23.16■■□□□ 1.3
GTF3A-201ENST00000381140 SNAPC2Q13487 334 aa23.16■■□□□ 1.3
GTF3A-201ENST00000381140 CERKLQ49MI3 558 aaPredicted RBP23.16■■□□□ 1.3
GTF3A-201ENST00000381140 MS4A4AQ96JQ5 239 aa23.16■■□□□ 1.3
GTF3A-201ENST00000381140 RNF186Q9NXI6 227 aa23.16■■□□□ 1.3
GTF3A-201ENST00000381140 TRIM75PA6NK02 468 aa23.15■■□□□ 1.3
GTF3A-201ENST00000381140 GH2P01242 217 aa23.15■■□□□ 1.3
GTF3A-201ENST00000381140 ASNSP08243 561 aa23.15■■□□□ 1.3
GTF3A-201ENST00000381140 GABPAQ06546 454 aa23.15■■□□□ 1.3
GTF3A-201ENST00000381140 TATDN1Q6P1N9 297 aa23.15■■□□□ 1.3
GTF3A-201ENST00000381140 BRI3BPQ8WY22 251 aa23.15■■□□□ 1.3
GTF3A-201ENST00000381140 ZBTB21Q9ULJ3 1066 aa23.15■■□□□ 1.3
GTF3A-201ENST00000381140 MPHOSPH10O00566 681 aaKnown RBP23.14■■□□□ 1.3
GTF3A-201ENST00000381140 CETPP11597 493 aa23.14■■□□□ 1.3
GTF3A-201ENST00000381140 INHBEP58166 350 aa23.14■■□□□ 1.3
GTF3A-201ENST00000381140 ABCB5Q2M3G0 1257 aa23.14■■□□□ 1.3
GTF3A-201ENST00000381140 SBK1Q52WX2 424 aa23.14■■□□□ 1.3
GTF3A-201ENST00000381140 IFNL1Q8IU54 200 aa23.14■■□□□ 1.3
GTF3A-201ENST00000381140 SWAP70Q9UH65 585 aa23.14■■□□□ 1.3
GTF3A-201ENST00000381140 USP17L5A8MUK1 530 aa23.14■■□□□ 1.29
GTF3A-201ENST00000381140 IGF2BP3O00425 579 aaKnown RBP eCLIP23.14■■□□□ 1.29
GTF3A-201ENST00000381140 FOXP2O15409 715 aa23.14■■□□□ 1.29
GTF3A-201ENST00000381140 CDK8P49336 464 aa23.14■■□□□ 1.29
GTF3A-201ENST00000381140 MFAP1P55081 439 aaKnown RBP23.14■■□□□ 1.29
GTF3A-201ENST00000381140 AFG3L2Q9Y4W6 797 aa23.14■■□□□ 1.29
GTF3A-201ENST00000381140 CASP8AP2Q9UKL3 1982 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 CA12O43570 354 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 CTCFP49711 727 aaPredicted RBP23.13■■□□□ 1.29
GTF3A-201ENST00000381140 SPP2Q13103 211 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 RAB3GAP1Q15042 981 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 C16orf86Q6ZW13 317 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 PTPN18Q99952 460 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 CABP5Q9NP86 173 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 KCNH4Q9UQ05 1017 aa23.13■■□□□ 1.29
GTF3A-201ENST00000381140 OTUD7BQ6GQQ9 843 aa23.12■■□□□ 1.29
GTF3A-201ENST00000381140 GADL1Q6ZQY3 521 aa23.12■■□□□ 1.29
GTF3A-201ENST00000381140 AS3MTQ9HBK9 375 aa23.12■■□□□ 1.29
GTF3A-201ENST00000381140 TESPA1A2RU30 521 aaPredicted RBP23.11■■□□□ 1.29
GTF3A-201ENST00000381140 CXCL11O14625 94 aa23.11■■□□□ 1.29
GTF3A-201ENST00000381140 TBC1D8O95759 1140 aa23.11■■□□□ 1.29
GTF3A-201ENST00000381140 HSPD1P10809 573 aaKnown RBP23.11■■□□□ 1.29
GTF3A-201ENST00000381140 HSPA8P11142 646 aaKnown RBP23.11■■□□□ 1.29
GTF3A-201ENST00000381140 CHMLP26374 656 aa23.11■■□□□ 1.29
GTF3A-201ENST00000381140 LBX1P52954 281 aa23.11■■□□□ 1.29
GTF3A-201ENST00000381140 ZNF280CQ8ND82 737 aa23.11■■□□□ 1.29
GTF3A-201ENST00000381140 PPARAQ07869 468 aa23.1■■□□□ 1.29
GTF3A-201ENST00000381140 FAM43AQ8N2R8 423 aa23.1■■□□□ 1.29
GTF3A-201ENST00000381140 MKNK2Q9HBH9 465 aa23.1■■□□□ 1.29
GTF3A-201ENST00000381140 GINM1Q9NU53 330 aa23.1■■□□□ 1.29
GTF3A-201ENST00000381140 SAGE1Q9NXZ1 904 aa23.1■■□□□ 1.29
GTF3A-201ENST00000381140 BTBD19C9JJ37 291 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 ALDH1A1P00352 501 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 AKR1B1P15121 316 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 CTDSPL2Q05D32 466 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 SEPT2Q15019 361 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 RUFY2Q8WXA3 655 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 IL25Q9H293 177 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 ROBO3Q96MS0 1386 aa23.09■■□□□ 1.29
GTF3A-201ENST00000381140 LAMA4Q16363 1823 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 A0A0G2JLL6 359 aaPredicted RBP23.08■■□□□ 1.29
GTF3A-201ENST00000381140 PRDM1O75626 825 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 FGAP02671 866 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 SLC3A2P08195 630 aaKnown RBP23.08■■□□□ 1.29
GTF3A-201ENST00000381140 MTMR2Q13614 643 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 BMP2KLQ5H9B9 411 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 PRRT2Q7Z6L0 340 aaPredicted RBP23.08■■□□□ 1.29
GTF3A-201ENST00000381140 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 TAOK2Q9UL54 1235 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 LOC285556D6RIA3 1793 aa23.08■■□□□ 1.29
GTF3A-201ENST00000381140 HMGCS2P54868 508 aa23.07■■□□□ 1.28
GTF3A-201ENST00000381140 DGKZQ13574 1117 aa23.07■■□□□ 1.28
GTF3A-201ENST00000381140 TAF1CQ15572 869 aaPredicted RBP23.07■■□□□ 1.28
GTF3A-201ENST00000381140 ALX1Q15699 326 aa23.07■■□□□ 1.28
GTF3A-201ENST00000381140 FEZ1Q99689 392 aa23.07■■□□□ 1.28
GTF3A-201ENST00000381140 WDR18Q9BV38 432 aa23.07■■□□□ 1.28
GTF3A-201ENST00000381140 GUCY1A2P33402 732 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 HAND2P61296 217 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 MOGSQ13724 837 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 ZYXQ15942 572 aaKnown RBP23.06■■□□□ 1.28
GTF3A-201ENST00000381140 TMEM179Q6ZVK1 233 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 FASTKD5Q7L8L6 764 aaKnown RBP23.06■■□□□ 1.28
GTF3A-201ENST00000381140 CLEC10AQ8IUN9 316 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 CCDC17Q96LX7 622 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 RAD50Q92878 1312 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 MYH4Q9Y623 1939 aa23.06■■□□□ 1.28
GTF3A-201ENST00000381140 RASA1P20936 1047 aa23.05■■□□□ 1.28
GTF3A-201ENST00000381140 PDE4BQ07343 736 aa23.05■■□□□ 1.28
GTF3A-201ENST00000381140 R3HDMLQ9H3Y0 253 aa23.05■■□□□ 1.28
GTF3A-201ENST00000381140 ZNF287Q9HBT7 754 aa23.05■■□□□ 1.28
GTF3A-201ENST00000381140 GREB1LQ9C091 1923 aaPredicted RBP23.04■■□□□ 1.28
GTF3A-201ENST00000381140 USP17L10C9JJH3 530 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms