RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 KIAA0825Q8IV33 1275 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 PLEKHA8P1O95397 391 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 ALDH8A1Q9H2A2 487 aaPredicted RBP14.24□□□□□ -0.13
CDX2-201ENST00000381020 EPB41L4AQ9HCS5 686 aaPredicted RBP14.24□□□□□ -0.13
CDX2-201ENST00000381020 NEMFO60524 1076 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 KLRK1P26718 216 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 IQUBQ8NA54 791 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 TSC1Q92574 1164 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 GOLPH3LQ9H4A5 285 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 C6orf50Q9HD87 102 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 ATP8A2Q9NTI2 1148 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 POLR3EQ9NVU0 708 aa14.24□□□□□ -0.13
CDX2-201ENST00000381020 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.24□□□□□ -0.13
CDX2-201ENST00000381020 V9GYY5 206 aaPredicted RBP14.24□□□□□ -0.13
CDX2-201ENST00000381020 UBE2Q2LH0YL09 131 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 TMEM266Q2M3C6 531 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 SLC44A5Q8NCS7 719 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
CDX2-201ENST00000381020 UBA5Q9GZZ9 404 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 USP17L3A6NCW0 530 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 USP17L4A6NCW7 530 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 FDPSP14324 419 aaKnown RBP14.23□□□□□ -0.13
CDX2-201ENST00000381020 USP17L1Q7RTZ2 530 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 CALML4Q96GE6 196 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 GJD4Q96KN9 370 aaPredicted RBP14.23□□□□□ -0.13
CDX2-201ENST00000381020 XPO4Q9C0E2 1151 aaKnown RBP14.23□□□□□ -0.13
CDX2-201ENST00000381020 BLZF1Q9H2G9 400 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 PCDHA5Q9Y5H7 936 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 KIF28PB7ZC32 967 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 FMNL1O95466 1100 aaPredicted RBP14.23□□□□□ -0.13
CDX2-201ENST00000381020 GUCY1A2P33402 732 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 NLRP12P59046 1061 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 FANCCQ00597 558 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 GRAMD1CQ8IYS0 662 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 VEZTQ9HBM0 779 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 NFE2L3Q9Y4A8 694 aa14.23□□□□□ -0.13
CDX2-201ENST00000381020 BCL9O00512 1426 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 CCP110O43303 1012 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 CDC25AP30304 524 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 SNW1Q13573 536 aaKnown RBP14.22□□□□□ -0.13
CDX2-201ENST00000381020 POSTNQ15063 836 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 ARHGAP29Q52LW3 1261 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 CEP135Q66GS9 1140 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 TRIM47Q96LD4 638 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 CPVLQ9H3G5 476 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 ZNHIT6Q9NWK9 470 aaKnown RBP14.22□□□□□ -0.13
CDX2-201ENST00000381020 PCDHB6Q9Y5E3 794 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 GRAPQ13588 217 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 KRT27Q7Z3Y8 459 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 GRAPLQ8TC17 118 aaPredicted RBP14.22□□□□□ -0.13
CDX2-201ENST00000381020 USP40Q9NVE5 1235 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 LEMD3Q9Y2U8 911 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 ASIC1P78348 528 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 PPP2R5BQ15173 497 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 ENOX2Q16206 610 aaKnown RBP14.22□□□□□ -0.13
CDX2-201ENST00000381020 LRRC47Q8N1G4 583 aaKnown RBP14.22□□□□□ -0.13
CDX2-201ENST00000381020 RAB34Q9BZG1 259 aa14.22□□□□□ -0.13
CDX2-201ENST00000381020 ATP2B4P23634 1241 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 RBM26Q5T8P6 1007 aaKnown RBP14.21□□□□□ -0.13
CDX2-201ENST00000381020 PYCARDQ9ULZ3 195 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 KLRF2D3W0D1 207 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 SCG2P13521 617 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 ENAHQ8N8S7 591 aaPredicted RBP14.21□□□□□ -0.13
CDX2-201ENST00000381020 A0A1W2PQ27 194 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 A0A1W2PQ64 194 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 A0A1W2PQD8 194 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 CCT6AP40227 531 aaKnown RBP14.21□□□□□ -0.13
CDX2-201ENST00000381020 PTGDRQ13258 359 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 OXER1Q8TDS5 423 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 STAG1Q8WVM7 1258 aa14.21□□□□□ -0.13
CDX2-201ENST00000381020 DCP1AQ9NPI6 582 aaPredicted RBP14.21□□□□□ -0.13
CDX2-201ENST00000381020 FRMPD2Q68DX3 1309 aaPredicted RBP14.21□□□□□ -0.14
CDX2-201ENST00000381020 SLIT3O75094 1523 aa14.21□□□□□ -0.14
CDX2-201ENST00000381020 CHD2O14647 1828 aaKnown RBP14.21□□□□□ -0.14
CDX2-201ENST00000381020 SEMA3EO15041 775 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 MMP1P03956 469 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 HMGB2P26583 209 aaKnown RBP14.2□□□□□ -0.14
CDX2-201ENST00000381020 GNA11P29992 359 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 MTIF2P46199 727 aaKnown RBP14.2□□□□□ -0.14
CDX2-201ENST00000381020 VPS72Q15906 364 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 INF2Q27J81 1249 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 DEF6Q9H4E7 631 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 TOPAZ1Q8N9V7 1692 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 COBLO75128 1261 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 SF3B3Q15393 1217 aaKnown RBP14.2□□□□□ -0.14
CDX2-201ENST00000381020 CCDC150Q8NCX0 1101 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 SH3RF3Q8TEJ3 882 aaPredicted RBP14.2□□□□□ -0.14
CDX2-201ENST00000381020 EEF2KMTQ96G04 330 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 FEZ1Q99689 392 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 DBNDD1Q9H9R9 158 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 BAZ2BQ9UIF8 2168 aaKnown RBP14.2□□□□□ -0.14
CDX2-201ENST00000381020 CCNT1O60563 726 aaKnown RBP14.2□□□□□ -0.14
CDX2-201ENST00000381020 TXKP42681 527 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 TICAM2Q86XR7 235 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 IGDCC4Q8TDY8 1250 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 CSRNP2Q9H175 543 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms