RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ADALQ6DHV7 355 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 GNG11P61952 73 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 HS1BP3Q53T59 392 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-203ENST00000380877 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 SPAG5Q96R06 1193 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 ITSN1Q15811 1721 aa13.85□□□□□ -0.19
GABPB1-203ENST00000380877 PTGS1P23219 599 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 USP8P40818 1118 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 ERLIN2O94905 339 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 LARGE1O95461 756 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 PICK1Q9NRD5 415 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 DDAH1O94760 285 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 CYP2E1P05181 493 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-203ENST00000380877 MMP10P09238 476 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
GABPB1-203ENST00000380877 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
GABPB1-203ENST00000380877 DNA2P51530 1060 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 CELF1Q92879 486 aaKnown RBP13.84□□□□□ -0.19
GABPB1-203ENST00000380877 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
GABPB1-203ENST00000380877 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.19
GABPB1-203ENST00000380877 MARCH10Q8NA82 808 aaPredicted RBP13.83□□□□□ -0.19
GABPB1-203ENST00000380877 CBX8Q9HC52 389 aa13.83□□□□□ -0.19
GABPB1-203ENST00000380877 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 SCG2P13521 617 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 CCT6AP40227 531 aaKnown RBP13.83□□□□□ -0.2
GABPB1-203ENST00000380877 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 SMCO2A6NFE2 343 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 FAM13AO94988 1023 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 ADRA2BP18089 450 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 CLCN1P35523 988 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.2
GABPB1-203ENST00000380877 AXDND1Q5T1B0 1012 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-203ENST00000380877 LRRC47Q8N1G4 583 aaKnown RBP13.83□□□□□ -0.2
GABPB1-203ENST00000380877 BICD1Q96G01 975 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 MMRN2Q9H8L6 949 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 GOLGA8HP0CJ92 632 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 LRWD1Q9UFC0 647 aa13.83□□□□□ -0.2
GABPB1-203ENST00000380877 NCOA3Q9Y6Q9 1424 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 COL3A1P02461 1466 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-203ENST00000380877 PDIA6Q15084 440 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 VPS72Q15906 364 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 CCDC174Q6PII3 467 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 HS2ST1Q7LGA3 356 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 PDCL2Q8N4E4 241 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 ZSWIM5Q9P217 1185 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 MECOMQ03112 1051 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 SKIDA1Q1XH10 827 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 USH1GQ495M9 461 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 BLIDQ8IZY5 108 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 DBNDD1Q9H9R9 158 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 CPDO75976 1380 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 NR1I2O75469 434 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 DCCP43146 1447 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 SLIT1O75093 1534 aa13.82□□□□□ -0.2
GABPB1-203ENST00000380877 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 CPXCR1Q8N123 301 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 PFKFB1P16118 471 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 CYLC1P35663 651 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-203ENST00000380877 PAFAH1B1P43034 410 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 PDE4DQ08499 809 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 CERKLQ49MI3 558 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-203ENST00000380877 CCDC65Q8IXS2 484 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 PKD2L1Q9P0L9 805 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 ZBTB21Q9ULJ3 1066 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 CYP2D7A0A087X1C5 515 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 B4DLN1 442 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 UBXN1Q04323 297 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 POSTNQ15063 836 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 NKX1-1Q15270 411 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-203ENST00000380877 MAPK8IP1Q9UQF2 711 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 REREQ9P2R6 1566 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 ARHGAP23Q9P227 1491 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-203ENST00000380877 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 SNX29Q8TEQ0 813 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-203ENST00000380877 ALS2CR12Q96Q35 445 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.81□□□□□ -0.2
GABPB1-203ENST00000380877 MST1RQ04912 1400 aa13.81□□□□□ -0.2
GABPB1-203ENST00000380877 MAP2P11137 1827 aaKnown RBP13.81□□□□□ -0.2
GABPB1-203ENST00000380877 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 KRT13P13646 458 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 NPR1P16066 1061 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 FRMPD2Q68DX3 1309 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 TCP10L2B9ZVM9 353 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 SP4Q02446 784 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 TNFAIP1Q13829 316 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 TMCO3Q6UWJ1 677 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 STAMQ92783 540 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 GPKOWQ92917 476 aaPredicted RBP eCLIP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 HOOK2Q96ED9 719 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms