RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 POLR2DO15514 142 aaKnown RBP16.18■□□□□ 0.18
PRDM16-203ENST00000378391 DBNDD2Q9BQY9 259 aa16.18■□□□□ 0.18
PRDM16-203ENST00000378391 CTNND2Q9UQB3 1225 aa16.18■□□□□ 0.18
PRDM16-203ENST00000378391 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRDM16-203ENST00000378391 SUCLG2Q96I99 432 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 B4E1Z4 1266 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 MBD4O95243 580 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 RFC4P35249 363 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 SETDB2Q96T68 719 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 SYNRGQ9UMZ2 1314 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 TRAF5O00463 557 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 PLCB3Q01970 1234 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 BEND3Q5T5X7 828 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 MAP4K1Q92918 833 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 XPO4Q9C0E2 1151 aaKnown RBP16.17■□□□□ 0.18
PRDM16-203ENST00000378391 LGR6Q9HBX8 967 aa16.17■□□□□ 0.18
PRDM16-203ENST00000378391 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
PRDM16-203ENST00000378391 ZC3H13Q5T200 1668 aaKnown RBP16.17■□□□□ 0.18
PRDM16-203ENST00000378391 GOLGA6CA6NDK9 693 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 GOLGA6DP0CG33 693 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 CNNM4Q6P4Q7 775 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 C11orf57Q6ZUT1 292 aaPredicted RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 GOLGA6AQ9NYA3 693 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 LMNTD2Q8IXW0 634 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 HELBQ8NG08 1087 aaPredicted RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 UBLCP1Q8WVY7 318 aaPredicted RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 KRT9P35527 623 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 PAK1Q13153 545 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 IP6K1Q92551 441 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 STIM2Q9P246 746 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 EIF4A1P60842 406 aaKnown RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 PDE4DQ08499 809 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 ZNF804AQ7Z570 1209 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 IFT20Q8IY31 132 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 DDX27Q96GQ7 796 aaKnown RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 EEF2P13639 858 aaKnown RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 CSGALNACT2Q8N6G5 542 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 EDC3Q96F86 508 aaKnown RBP16.16■□□□□ 0.18
PRDM16-203ENST00000378391 PLIN2Q99541 437 aa16.16■□□□□ 0.18
PRDM16-203ENST00000378391 USP32Q8NFA0 1604 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 SMIM23A6NLE4 172 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 MAP3K9P80192 1104 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 PPP1R7Q15435 360 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 PFDN1O60925 122 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 LACTBP83111 547 aaPredicted RBP16.15■□□□□ 0.18
PRDM16-203ENST00000378391 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 LRRC45Q96CN5 670 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 KCNK9Q9NPC2 374 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 MLH3Q9UHC1 1453 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 TMEM110-MUSTN1A8MSY1 372 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 ATP5DP30049 168 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 ZBTB9Q96C00 473 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 EAF2Q96CJ1 260 aaPredicted RBP16.15■□□□□ 0.18
PRDM16-203ENST00000378391 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 ZKSCAN3Q9BRR0 538 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 COL3A1P02461 1466 aaPredicted RBP16.15■□□□□ 0.18
PRDM16-203ENST00000378391 ACTN4O43707 911 aaKnown RBP16.15■□□□□ 0.18
PRDM16-203ENST00000378391 ST5P78524 1137 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 RAPGEF1Q13905 1077 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 SECISBP2LQ93073 1101 aaKnown RBP16.15■□□□□ 0.18
PRDM16-203ENST00000378391 ARHGEF40Q8TER5 1519 aa16.15■□□□□ 0.18
PRDM16-203ENST00000378391 CCDC25Q86WR0 208 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
PRDM16-203ENST00000378391 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
PRDM16-203ENST00000378391 NKIRAS1Q9NYS0 192 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 ATP2A2P16615 1042 aaKnown RBP16.14■□□□□ 0.17
PRDM16-203ENST00000378391 INPP5BP32019 993 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 SEL1L2Q5TEA6 688 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 OTUD7BQ6GQQ9 843 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 ZNF365Q70YC5 407 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 CROCCP2Q86T23 111 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 CCDC50Q8IVM0 306 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 IFT74Q96LB3 600 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
PRDM16-203ENST00000378391 ALDH3A1P30838 453 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 POLA2Q14181 598 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 RUFY4Q6ZNE9 571 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 LRRC43Q8N309 656 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 GPR161Q8N6U8 529 aaKnown RBP16.14■□□□□ 0.17
PRDM16-203ENST00000378391 NOX5Q96PH1 765 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 POSTNQ15063 836 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 ADALQ6DHV7 355 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 MKRN1Q9UHC7 482 aaKnown RBP16.14■□□□□ 0.17
PRDM16-203ENST00000378391 COMMD10Q9Y6G5 202 aa16.14■□□□□ 0.17
PRDM16-203ENST00000378391 GPAA1O43292 621 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 KRT40Q6A162 431 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 RPGRIP1Q96KN7 1286 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 LMTK2Q8IWU2 1503 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 GOLGA6BA6NDN3 693 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms