RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 EEF2KMTQ96G04 330 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 SV2BQ7L1I2 683 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 DYMQ7RTS9 669 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 TSC1Q92574 1164 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 PUF60Q9UHX1 559 aaKnown RBP14.88□□□□□ -0.03
NPHP4-203ENST00000378169 CARMIL3Q8ND23 1372 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 TRAF5O00463 557 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 PLCD1P51178 756 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 MCM6Q14566 821 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 INCENPQ9NQS7 918 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■■■■■ 148.9
NPHP4-203ENST00000378169 CLTCQ00610 1675 aaKnown RBP14.88□□□□□ -0.03
NPHP4-203ENST00000378169 ADGRB1O14514 1584 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 ERVV-1B6SEH8 477 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 AKR1B15C9JRZ8 316 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-203ENST00000378169 CHMP2AO43633 222 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 MAP9Q49MG5 647 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-203ENST00000378169 USP40Q9NVE5 1235 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 NEFHP12036 1026 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 USH1GQ495M9 461 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 PPP4R3AQ6IN85 833 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 CSGALNACT2Q8N6G5 542 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 PPP1R9BQ96SB3 815 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 LRWD1Q9UFC0 647 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 PIK3C2BO00750 1634 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 NCAPD2Q15021 1401 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 BICDL2A1A5D9 508 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 H0YIN7 160 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 KIF5AQ12840 1032 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 TRAF1Q13077 416 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 NR5A1Q13285 461 aa14.87□□□□□ -0.03
NPHP4-203ENST00000378169 SYNRGQ9UMZ2 1314 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 MED23Q9ULK4 1368 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.86□□□□□ -0.03
NPHP4-203ENST00000378169 INF2Q27J81 1249 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 LRRC47Q8N1G4 583 aaKnown RBP14.86□□□□□ -0.03
NPHP4-203ENST00000378169 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 CAPZA3Q96KX2 299 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 TAB2Q9NYJ8 693 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 CTAGE15A4D2H0 777 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 SMCO2A6NFE2 343 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 KLRF2D3W0D1 207 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 CTAGE8P0CG41 777 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 CMA1P23946 247 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 TOB2Q14106 344 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-203ENST00000378169 CTAGE6Q86UF2 777 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 CTAGE4Q8IX94 777 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 REXO1Q8N1G1 1221 aaKnown RBP14.86□□□□□ -0.03
NPHP4-203ENST00000378169 LARGE2Q8N3Y3 721 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 BICD1Q96G01 975 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 BIN2Q9UBW5 565 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-203ENST00000378169 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
NPHP4-203ENST00000378169 TRIM37O94972 964 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 BTDP43251 543 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 DIXDC1Q155Q3 683 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 SMIM5Q71RC9 77 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 SNX29Q8TEQ0 813 aa14.86□□□□□ -0.03
NPHP4-203ENST00000378169 CYP2E1P05181 493 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-203ENST00000378169 SCARF1Q14162 830 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 FERMT2Q96AC1 680 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 FRMPD2Q68DX3 1309 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-203ENST00000378169 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-203ENST00000378169 CTNNBL1Q8WYA6 563 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-203ENST00000378169 NOC4LQ9BVI4 516 aaKnown RBP14.85□□□□□ -0.03
NPHP4-203ENST00000378169 IL25Q9H293 177 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 ZDHHC9Q9Y397 364 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 PCDHA5Q9Y5H7 936 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 CTAGE9A4FU28 777 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 KCNQ2O43526 872 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 FAM13AO94988 1023 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 PAK1Q13153 545 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 CPXCR1Q8N123 301 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 GPR101Q96P66 508 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-203ENST00000378169 ARFGAP3Q9NP61 516 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 TBC1D7Q9P0N9 293 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
NPHP4-203ENST00000378169 IGSF3O75054 1194 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 BMS1Q14692 1282 aaKnown RBP14.84□□□□□ -0.03
NPHP4-203ENST00000378169 CCDC113Q9H0I3 377 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 MRVI1Q9Y6F6 885 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 NRKQ7Z2Y5 1582 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 KRT86O43790 486 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 MYCNP04198 464 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-203ENST00000378169 POTEJP0CG39 1038 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 SCG2P13521 617 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 PTGDRQ13258 359 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 DCAF17Q5H9S7 520 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-203ENST00000378169 CCDC174Q6PII3 467 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 HS2ST1Q7LGA3 356 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 EHBP1Q8NDI1 1231 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 RASGRP4Q8TDF6 673 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 NRBP1Q9UHY1 535 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 GJA3Q9Y6H8 435 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 KRT9P35527 623 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 LONRF3Q496Y0 759 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 KRT25Q7Z3Z0 450 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 BLIDQ8IZY5 108 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms