RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 OGFRQ9NZT2 677 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 PCDHA7Q9UN72 937 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 ADORA1P30542 326 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 PNOCQ13519 176 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 C6orf163Q5TEZ5 329 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-201ENST00000378156 RSPH14Q9UHP6 348 aa16.86■□□□□ 0.29
NPHP4-201ENST00000378156 TULP4Q9NRJ4 1543 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 CHRNDQ07001 517 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 CCDC65Q8IXS2 484 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 MRVI1Q9Y6F6 885 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 KRT83P78385 493 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 TCP10Q12799 353 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 ZBTB21Q9ULJ3 1066 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 CTNND2Q9UQB3 1225 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 EVCP57679 992 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 TRMT44Q8IYL2 757 aaKnown RBP16.85■□□□□ 0.29
NPHP4-201ENST00000378156 CMTR1Q8N1G2 835 aaKnown RBP16.85■□□□□ 0.29
NPHP4-201ENST00000378156 PYCARDQ9ULZ3 195 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 LUC7L2Q9Y383 392 aaKnown RBP16.85■□□□□ 0.29
NPHP4-201ENST00000378156 ARID5AQ03989 594 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 KIF5AQ12840 1032 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 NECTIN1Q15223 517 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.294e-8■■■■□ 26.3
NPHP4-201ENST00000378156 ELF2Q15723 593 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 FAM47AQ5JRC9 791 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 CNGA4Q8IV77 575 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 ZNF654Q8IZM8 581 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 FLAD1Q8NFF5 587 aa16.85■□□□□ 0.29
NPHP4-201ENST00000378156 RHOXF2BP0C7M4 288 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 PPP1R2P41236 205 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 MLKLQ8NB16 471 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 NEK11Q8NG66 645 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 RHOXF2Q9BQY4 288 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 LAMC1P11047 1609 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 BACH1O14867 736 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 CIAO1O76071 339 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 PDE6BP35913 854 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 STAMQ92783 540 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 ALKQ9UM73 1620 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
NPHP4-201ENST00000378156 TACC1O75410 805 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 TXKP42681 527 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 PTPN12Q05209 780 aaKnown RBP16.84■□□□□ 0.29
NPHP4-201ENST00000378156 POSTNQ15063 836 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 KRT25Q7Z3Z0 450 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 DDX12PQ92771 950 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 CAPZA3Q96KX2 299 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 PLVAPQ9BX97 442 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 FTOQ9C0B1 505 aaKnown RBP eCLIP16.84■□□□□ 0.29
NPHP4-201ENST00000378156 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
NPHP4-201ENST00000378156 PHKA1P46020 1223 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 ZMYM1Q5SVZ6 1142 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-201ENST00000378156 IMPG2Q9BZV3 1241 aa16.84■□□□□ 0.29
NPHP4-201ENST00000378156 KRT86O43790 486 aa16.83■□□□□ 0.29
NPHP4-201ENST00000378156 CAPN2P17655 700 aa16.83■□□□□ 0.29
NPHP4-201ENST00000378156 RPL13P26373 211 aaKnown RBP16.83■□□□□ 0.29
NPHP4-201ENST00000378156 ARID4AP29374 1257 aaPredicted RBP16.83■□□□□ 0.29
NPHP4-201ENST00000378156 UBE4AQ14139 1066 aa16.83■□□□□ 0.29
NPHP4-201ENST00000378156 VPS54Q9P1Q0 977 aa16.83■□□□□ 0.29
NPHP4-201ENST00000378156 ATP2B4P23634 1241 aa16.83■□□□□ 0.28
NPHP4-201ENST00000378156 NSRP1Q9H0G5 558 aaKnown RBP16.83■□□□□ 0.28
NPHP4-201ENST00000378156 PICK1Q9NRD5 415 aa16.83■□□□□ 0.28
NPHP4-201ENST00000378156 NRBP1Q9UHY1 535 aa16.83■□□□□ 0.28
NPHP4-201ENST00000378156 NDUFA8P51970 172 aa16.83■□□□□ 0.28
NPHP4-201ENST00000378156 SP4Q02446 784 aa16.83■□□□□ 0.28
NPHP4-201ENST00000378156 CARD6Q9BX69 1037 aa16.83■□□□□ 0.28
NPHP4-201ENST00000378156 CLIC4Q9Y696 253 aa16.83■□□□□ 0.28
NPHP4-201ENST00000378156 A0A087WWV3 80 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 EBAG9O00559 213 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 UBE3CQ15386 1083 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 ZYXQ15942 572 aaKnown RBP16.82■□□□□ 0.28
NPHP4-201ENST00000378156 NSUN7Q8NE18 718 aaKnown RBP16.82■□□□□ 0.28
NPHP4-201ENST00000378156 SDR42E1Q8WUS8 393 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 TRAF5O00463 557 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 PDE4DQ08499 809 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 SPATA24Q86W54 205 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 TEKT1Q969V4 418 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 MTX1Q13505 466 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-201ENST00000378156 MED14O60244 1454 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 DLGAP5Q15398 846 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 CCDC155Q8N6L0 562 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 FBXO18Q8NFZ0 1043 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 SETBP1Q9Y6X0 1596 aa16.82■□□□□ 0.28
NPHP4-201ENST00000378156 PPIP5K2O43314 1243 aa16.81■□□□□ 0.28
NPHP4-201ENST00000378156 ADCY7P51828 1080 aa16.81■□□□□ 0.28
NPHP4-201ENST00000378156 HAUS3Q68CZ6 603 aa16.81■□□□□ 0.28
NPHP4-201ENST00000378156 SERTAD1Q9UHV2 236 aa16.81■□□□□ 0.28
NPHP4-201ENST00000378156 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
NPHP4-201ENST00000378156 BAG6P46379 1132 aa16.81■□□□□ 0.28
NPHP4-201ENST00000378156 KIAA0753Q2KHM9 967 aa16.81■□□□□ 0.28
NPHP4-201ENST00000378156 PKD2L1Q9P0L9 805 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms