RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PNOCQ13519 176 aa22.18■■□□□ 1.14
PCDHA4-201ENST00000378125 RGS22Q8NE09 1264 aa22.18■■□□□ 1.14
PCDHA4-201ENST00000378125 PRR5LQ6MZQ0 368 aa22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 KIAA1524Q8TCG1 905 aa22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 NAT10Q9H0A0 1025 aaKnown RBP22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 IRS2Q9Y4H2 1338 aa22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 TPM3P06753 285 aa22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 PKN1Q16512 942 aa22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 RESP18Q5W5W9 173 aa22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 HPSEQ9Y251 543 aa22.17■■□□□ 1.14
PCDHA4-201ENST00000378125 TROAPQ12815 778 aa22.16■■□□□ 1.14
PCDHA4-201ENST00000378125 ARID5BQ14865 1188 aa22.16■■□□□ 1.14
PCDHA4-201ENST00000378125 LONRF3Q496Y0 759 aa22.16■■□□□ 1.14
PCDHA4-201ENST00000378125 LDHBP07195 334 aaKnown RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 RPGRQ92834 1020 aaKnown RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 FOXP1Q9H334 677 aaPredicted RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 LY75O60449 1722 aa22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 TSPY2A6NKD2 308 aa22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 FOXN1O15353 648 aa22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 EARS2Q5JPH6 523 aaKnown RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 KRI1Q8N9T8 703 aaKnown RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 SH3RF3Q8TEJ3 882 aaPredicted RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 DYNLL2Q96FJ2 89 aa22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 RNF26Q9BY78 433 aaPredicted RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 ATP8A2Q9NTI2 1148 aa22.15■■□□□ 1.14
PCDHA4-201ENST00000378125 CUTAO60888 179 aa22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 FGRP09769 529 aa22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 USP5P45974 858 aa22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 NLRP12P59046 1061 aa22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 GPSM2P81274 684 aa22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 KCNH3Q9ULD8 1083 aa22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 PDS5AQ29RF7 1337 aaKnown RBP22.14■■□□□ 1.14
PCDHA4-201ENST00000378125 UQCRHLA0A096LP55 91 aa22.14■■□□□ 1.13
PCDHA4-201ENST00000378125 UQCRHP07919 91 aa22.14■■□□□ 1.13
PCDHA4-201ENST00000378125 HSPA1LP34931 641 aa22.14■■□□□ 1.13
PCDHA4-201ENST00000378125 FUT2Q10981 343 aa22.14■■□□□ 1.13
PCDHA4-201ENST00000378125 SARM1Q6SZW1 724 aa22.14■■□□□ 1.13
PCDHA4-201ENST00000378125 FILIP1Q7Z7B0 1213 aa22.14■■□□□ 1.13
PCDHA4-201ENST00000378125 BAZ2BQ9UIF8 2168 aaKnown RBP22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 TPM2P07951 284 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 RCAN1P53805 252 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 NOM1Q5C9Z4 860 aaKnown RBP22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 CACTINQ8WUQ7 758 aaKnown RBP22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 SBF2Q86WG5 1849 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 RILPL1Q5EBL4 403 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 SPTY2D1Q68D10 685 aaPredicted RBP22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 CNNM3Q8NE01 707 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 ARPP21Q9UBL0 812 aaPredicted RBP22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 MTMR7Q9Y216 660 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 MYH6P13533 1939 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 XDHP47989 1333 aa22.13■■□□□ 1.13
PCDHA4-201ENST00000378125 GYS1P13807 737 aa22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 METTL16Q86W50 562 aaKnown RBP22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 SRBD1Q8N5C6 995 aaKnown RBP22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 BCL11BQ9C0K0 894 aaPredicted RBP22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 SPTLC3Q9NUV7 552 aa22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 FBXO2Q9UK22 296 aaPredicted RBP22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 LEMD3Q9Y2U8 911 aa22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 UFL1O94874 794 aa22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 SERPINB2P05120 415 aa22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 PDE4BQ07343 736 aa22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 PDILTQ8N807 584 aa22.12■■□□□ 1.13
PCDHA4-201ENST00000378125 PRPF3O43395 683 aaKnown RBP22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 ORC4O43929 436 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 VEGFAP15692 232 aaPredicted RBP22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 TGFBRAP1Q8WUH2 860 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 TIGD1Q96MW7 591 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 SAP30BPQ9UHR5 308 aaKnown RBP22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 CCDC88AQ3V6T2 1871 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 RBM6P78332 1123 aaKnown RBP22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 TFAP4Q01664 338 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 KRBA2Q6ZNG9 492 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 TMTC3Q6ZXV5 915 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 USP49Q70CQ1 688 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 ZNF804AQ7Z570 1209 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 FOXP4Q8IVH2 680 aaPredicted RBP22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 CTCFLQ8NI51 663 aaPredicted RBP22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 WDR66Q8TBY9 1149 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 MRFAP1L1Q96HT8 127 aa22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 RBM28Q9NW13 759 aaKnown RBP22.11■■□□□ 1.13
PCDHA4-201ENST00000378125 WNT7AO00755 349 aa22.1■■□□□ 1.13
PCDHA4-201ENST00000378125 XBP1P17861 261 aa22.1■■□□□ 1.13
PCDHA4-201ENST00000378125 KRT2P35908 639 aa22.1■■□□□ 1.13
PCDHA4-201ENST00000378125 PHF20Q9BVI0 1012 aa22.1■■□□□ 1.13
PCDHA4-201ENST00000378125 POLR2DO15514 142 aaKnown RBP22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 TRIM37O94972 964 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 SMC2O95347 1197 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 PCP11498 1178 aaKnown RBP22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 CDC25BP30305 580 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 PPP2R5BQ15173 497 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 MAPKAPK5Q8IW41 473 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 GRAMD1CQ8IYS0 662 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 SLC44A5Q8NCS7 719 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 TRPC5Q9UL62 973 aaPredicted RBP22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 CALM1P0DP23 149 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 CALM2P0DP24 149 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 CALM3P0DP25 149 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms