RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 UHRF1BP1LA0JNW5 1464 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 PDE6BP35913 854 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 PSMB7Q99436 277 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 KDM5AP29375 1690 aaKnown RBP13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 SF3A3Q12874 501 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 IFT20Q8IY31 132 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 PHKBQ93100 1093 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 ZBED2Q9BTP6 218 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 PLEKHA4Q9H4M7 779 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 STIM2Q9P246 746 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 FRMD4BQ9Y2L6 1034 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 DNMT1P26358 1616 aaKnown RBP13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 ATP2A2P16615 1042 aaKnown RBP13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 PLCD1P51178 756 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 CFAP57Q96MR6 1250 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 TRIM31Q9BZY9 425 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 ATP5DP30049 168 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 POSTNQ15063 836 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 IFT74Q96LB3 600 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 A2MP01023 1474 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 PER1O15534 1290 aaPredicted RBP13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 TNFAIP3P21580 790 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 PCK1P35558 622 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 HS2ST1Q7LGA3 356 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 FCHSD1Q86WN1 690 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 KLHL7Q8IXQ5 586 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 BLZF1Q9H2G9 400 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 ANAPC4Q9UJX5 808 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 HGSO14964 777 aaPredicted RBP13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 ERCC3P19447 782 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 CSGALNACT2Q8N6G5 542 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 PPFIBP2Q8ND30 876 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 NELFBQ8WX92 580 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 DBNDD2Q9BQY9 259 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 TTLL3Q9Y4R7 772 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 ATP10BO94823 1461 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 MAST1Q9Y2H9 1570 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 MAK16Q9BXY0 300 aaKnown RBP13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 USP19O94966 1318 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 PLCH2O75038 1416 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 NOL3O60936 208 aaKnown RBP13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 ADKP55263 362 aaKnown RBP13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 CFAP157Q5JU67 520 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 NCAPG2Q86XI2 1143 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 XAGE2Q96GT9 111 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 NOX5Q96PH1 765 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 GCP02774 474 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 KRT9P35527 623 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 SLF1Q9BQI6 1058 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 TRPM2O94759 1503 aa13.34□□□□□ -0.27
PCDHA9-201ENST00000378122 TSPOAP1O95153 1857 aa13.33□□□□□ -0.27
PCDHA9-201ENST00000378122 NDC80O14777 642 aa13.33□□□□□ -0.27
PCDHA9-201ENST00000378122 ZNF500O60304 480 aaPredicted RBP13.33□□□□□ -0.27
PCDHA9-201ENST00000378122 E7EVH7 732 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 SLC5A4Q9NY91 659 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 CALUO43852 315 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 TTC38Q5R3I4 469 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 LMNTD2Q8IXW0 634 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 LRRC45Q96CN5 670 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 SPOPO43791 374 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 ME3Q16798 604 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 GPT2Q8TD30 523 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 XPO4Q9C0E2 1151 aaKnown RBP13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 TBC1D7Q9P0N9 293 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 KCNJ14Q9UNX9 436 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 AGTPBP1Q9UPW5 1226 aa13.33□□□□□ -0.28
PCDHA9-201ENST00000378122 RPL13P26373 211 aaKnown RBP13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 ZSCAN26Q16670 478 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 PZPP20742 1482 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 GSPT1P15170 499 aaKnown RBP13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 IL13P35225 146 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 TXKP42681 527 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 RAB3IL1Q8TBN0 382 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 ITGA6P23229 1130 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 C4orf50Q6ZRC1 276 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 EIF4G3O43432 1585 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms