RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PANX2Q96RD6 677 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 SLF1Q9BQI6 1058 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 PLVAPQ9BX97 442 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 TAB2Q9NYJ8 693 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 RRP15Q9Y3B9 282 aaKnown RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 KIF4AO95239 1232 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 TSPY3P0CV98 308 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 TSPY8P0CW00 308 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 DTNBO60941 627 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 SEC31AO94979 1220 aaKnown RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 TRIM58Q8NG06 486 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 PHKBQ93100 1093 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 NUCKS1Q9H1E3 243 aaKnown RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 PDE11AQ9HCR9 933 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 GNA11P29992 359 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 CEBPAP49715 358 aaPredicted RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 NAPAP54920 295 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 MTMR3Q13615 1198 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 MORC3Q14149 939 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 EFCAB13Q8IY85 973 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 RSRC1Q96IZ7 334 aaKnown RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 UBA5Q9GZZ9 404 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 PTPRMP28827 1452 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 COL3A1P02461 1466 aaPredicted RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 KCNJ18B7U540 433 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 IRS4O14654 1257 aaPredicted RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 KCNJ12Q14500 433 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 TNIP1Q15025 636 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 CLUL1Q15846 466 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 RUFY4Q6ZNE9 571 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 KIF23Q02241 960 aaPredicted RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 PRPF4BQ13523 1007 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 SV2BQ7L1I2 683 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 CPLX4Q7Z7G2 160 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 CSGALNACT2Q8N6G5 542 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 OR8K1Q8NGG5 319 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 CUL5Q93034 780 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 EDC3Q96F86 508 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 DESI2Q9BSY9 194 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 SAMD15Q9P1V8 674 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 PPLO60437 1756 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 TSGA10IPQ3SY00 556 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 CFAP221Q4G0U5 840 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 KRT79Q5XKE5 535 aa9.82□□□□□ -0.84
PCDH9-202ENST00000377865 DHX40Q8IX18 779 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 ENOX1Q8TC92 643 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 RRP36Q96EU6 259 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 SEC62Q99442 399 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 NAP1L3Q99457 506 aaPredicted RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 DBNLQ9UJU6 430 aaKnown RBP9.82□□□□□ -0.84
PCDH9-202ENST00000377865 FOXP1Q9H334 677 aaPredicted RBP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 CRB1P82279 1406 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 MROH5Q6ZUA9 1318 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 PPFIA4O75335 1185 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 TBCAO75347 108 aaKnown RBP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 PDE4DQ08499 809 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 TCERG1LQ5VWI1 586 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 NDUFB9Q9Y6M9 179 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 GSTTP1A0A1W2PQM5 241 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 H7C1D1 291 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 ZAP70P43403 619 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 PARD6BQ9BYG5 372 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 MROH2AA6NES4 1674 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 SND1Q7KZF4 910 aaKnown RBP eCLIP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 CAPS2Q9BXY5 557 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 MTRF1LQ9UGC7 380 aaKnown RBP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 HYOU1Q9Y4L1 999 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 SHPRHQ149N8 1683 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 ADGRB1O14514 1584 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 FMNL1O95466 1100 aaPredicted RBP9.81□□□□□ -0.84
PCDH9-202ENST00000377865 ITGA6P23229 1130 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 CCDC144BQ3MJ40 725 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 AKNAD1Q5T1N1 836 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 GSDMAQ96QA5 445 aa9.81□□□□□ -0.84
PCDH9-202ENST00000377865 WDR19Q8NEZ3 1342 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 ZNF532Q9HCE3 1301 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 A0A1B0GUA9 196 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 KCNQ3O43525 872 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 IBSPP21815 317 aaPredicted RBP9.8□□□□□ -0.84
PCDH9-202ENST00000377865 ATP5DP30049 168 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 DNM2P50570 870 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 PIK3AP1Q6ZUJ8 805 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 SELENOSQ9BQE4 189 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 ARMT1Q9H993 441 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 MAN1B1Q9UKM7 699 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 LPIN2Q92539 896 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 PLCB1Q9NQ66 1216 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 HOOK3Q86VS8 718 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 DENND2AQ9ULE3 1009 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 KCNJ14Q9UNX9 436 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 IQSEC3Q9UPP2 1182 aaPredicted RBP9.8□□□□□ -0.84
PCDH9-202ENST00000377865 ERCC6L2Q5T890 1561 aa9.8□□□□□ -0.84
PCDH9-202ENST00000377865 ANKARQ7Z5J8 1434 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms