RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 KANK3Q6NY19 840 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 ANKRD18AQ8IVF6 992 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 CMTR1Q8N1G2 835 aaKnown RBP13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 MLKLQ8NB16 471 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 OXER1Q8TDS5 423 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZSCAN10Q96SZ4 725 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 A0A1B0GUL6 1792 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 POLR2DO15514 142 aaKnown RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 SERPINC1P01008 464 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZNF18P17022 549 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 GYG1P46976 350 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 CT47A1Q5JQC4 288 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 SPECC1Q5M775 1068 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 BARGINQ6ZT62 677 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 NUP133Q8WUM0 1156 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ERO1AQ96HE7 468 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 FAM84BQ96KN1 310 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZMYND15Q9H091 742 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 DUOX1Q9NRD9 1551 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 PDS5AQ29RF7 1337 aaKnown RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 MINDY4BA8MYZ0 360 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 SEMA3EO15041 775 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZBTB22O15209 634 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 CCP110O43303 1012 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 TROAPQ12815 778 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 TBX2Q13207 712 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 CCDC82Q8N4S0 544 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ABCF2Q9UG63 623 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 SERTAD1Q9UHV2 236 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 MINPP1Q9UNW1 487 aa13.47□□□□□ -0.25
TNFRSF9-201ENST00000377507 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 SPATA31A5Q5VU36 1347 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 SPATA31A7Q8IWB4 1347 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 XBP1P17861 261 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 NAA30Q147X3 362 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 CFAP100Q494V2 611 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 DACH1Q9UI36 760 aa13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF9-201ENST00000377507 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 SLU7O95391 586 aaKnown RBP13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 CALM1P0DP23 149 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 CALM2P0DP24 149 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 CALM3P0DP25 149 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 TMEM139Q8IV31 216 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 MED15Q96RN5 788 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 CSRNP2Q9H175 543 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 SCN7AQ01118 1682 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 ORC4O43929 436 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 DDAH1O94760 285 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 ERCC5P28715 1186 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 CTR9Q6PD62 1173 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 TMED8Q6PL24 325 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 SH3RF1Q7Z6J0 888 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 CATIPQ7Z7H3 387 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 ARID3AQ99856 593 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
TNFRSF9-201ENST00000377507 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 TMEM232C9JQI7 657 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 BMP15O95972 392 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 KRT2P35908 639 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 DYNLL1P63167 89 aaKnown RBP13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 AKAP17AQ02040 695 aaKnown RBP13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 NPY5RQ15761 445 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 IFIT1BQ5T764 474 aaKnown RBP13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 USP49Q70CQ1 688 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 IQCA1Q86XH1 822 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
TNFRSF9-201ENST00000377507 EARS2Q5JPH6 523 aaKnown RBP13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 TRIM65Q6PJ69 517 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 NSUN4Q96CB9 384 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms