RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SHMT1P34896 483 aa15.26■□□□□ 0.03
CBWD3-203ENST00000377344 AK2P54819 239 aa15.26■□□□□ 0.03
CBWD3-203ENST00000377344 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
CBWD3-203ENST00000377344 TTC14Q96N46 770 aa15.26■□□□□ 0.03
CBWD3-203ENST00000377344 LARP6Q9BRS8 491 aaKnown RBP15.26■□□□□ 0.03
CBWD3-203ENST00000377344 PGAP2Q9UHJ9 254 aa15.26■□□□□ 0.03
CBWD3-203ENST00000377344 ERICH2A1L162 156 aa15.25■□□□□ 0.03
CBWD3-203ENST00000377344 MPHOSPH10O00566 681 aaKnown RBP15.25■□□□□ 0.03
CBWD3-203ENST00000377344 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
CBWD3-203ENST00000377344 CD2BP2O95400 341 aaKnown RBP15.25■□□□□ 0.03
CBWD3-203ENST00000377344 SART3Q15020 963 aaKnown RBP15.25■□□□□ 0.03
CBWD3-203ENST00000377344 USP48Q86UV5 1035 aa15.25■□□□□ 0.03
CBWD3-203ENST00000377344 HSCBQ8IWL3 235 aa15.25■□□□□ 0.03
CBWD3-203ENST00000377344 POLR2AP24928 1970 aaKnown RBP15.25■□□□□ 0.03
CBWD3-203ENST00000377344 WDR19Q8NEZ3 1342 aa15.25■□□□□ 0.03
CBWD3-203ENST00000377344 MYH8P13535 1937 aa15.25■□□□□ 0.03
CBWD3-203ENST00000377344 CERKLQ49MI3 558 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-203ENST00000377344 TMEM67Q5HYA8 995 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 DLK2Q6UY11 383 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 METTL16Q86W50 562 aaKnown RBP15.24■□□□□ 0.03
CBWD3-203ENST00000377344 BRF1Q92994 677 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 HOOK2Q96ED9 719 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 TBC1D12O60347 775 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 NMT2O60551 498 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 AKR1B1P15121 316 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 SUPT20HL1Q3ZLR7 823 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 IL27Q8NEV9 243 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 TMEM87BQ96K49 555 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 ZSCAN10Q96SZ4 725 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-203ENST00000377344 GPHNQ9NQX3 736 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-203ENST00000377344 TAOK2Q9UL54 1235 aa15.24■□□□□ 0.03
CBWD3-203ENST00000377344 NAP1L2Q9ULW6 460 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-203ENST00000377344 TNKSO95271 1327 aa15.23■□□□□ 0.03
CBWD3-203ENST00000377344 GDF11O95390 407 aa15.23■□□□□ 0.03
CBWD3-203ENST00000377344 NT5C2P49902 561 aa15.23■□□□□ 0.03
CBWD3-203ENST00000377344 TOB2Q14106 344 aaPredicted RBP15.23■□□□□ 0.03
CBWD3-203ENST00000377344 BECN1Q14457 450 aa15.23■□□□□ 0.03
CBWD3-203ENST00000377344 DCAF15Q66K64 600 aa15.23■□□□□ 0.03
CBWD3-203ENST00000377344 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
CBWD3-203ENST00000377344 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
CBWD3-203ENST00000377344 CDC37L1Q7L3B6 337 aa15.23■□□□□ 0.03
CBWD3-203ENST00000377344 GLIS2Q9BZE0 524 aaPredicted RBP15.23■□□□□ 0.03
CBWD3-203ENST00000377344 SH2B2O14492 632 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-203ENST00000377344 MCM2P49736 904 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 PRKG1Q13976 671 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 WTAPQ15007 396 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 NFXL1Q6ZNB6 911 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 NEDD1Q8NHV4 660 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 SNX21Q969T3 373 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 CCDC17Q96LX7 622 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 ALDH8A1Q9H2A2 487 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-203ENST00000377344 GPBP1L1Q9HC44 474 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-203ENST00000377344 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
CBWD3-203ENST00000377344 APOBRQ0VD83 1088 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 ABCB5Q2M3G0 1257 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 IGDCC4Q8TDY8 1250 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 TBC1D2Q9BYX2 928 aa15.22■□□□□ 0.03
CBWD3-203ENST00000377344 SHROOM1Q2M3G4 852 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-203ENST00000377344 IFIT1BQ5T764 474 aaKnown RBP15.21■□□□□ 0.03
CBWD3-203ENST00000377344 ENAHQ8N8S7 591 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-203ENST00000377344 CDCA5Q96FF9 252 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 MTA3Q9BTC8 594 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 ZNF341Q9BYN7 854 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 LY9Q9HBG7 655 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 CABP5Q9NP86 173 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 IL17RBQ9NRM6 502 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 DAXXQ9UER7 740 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-203ENST00000377344 STX8Q9UNK0 236 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 FZD1Q9UP38 647 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 LIMCH1Q9UPQ0 1083 aa15.21■□□□□ 0.03
CBWD3-203ENST00000377344 CCDC69A6NI79 296 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 K7ELQ4 463 aaPredicted RBP15.2■□□□□ 0.02
CBWD3-203ENST00000377344 GH2P01242 217 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 NF2P35240 595 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 MAP3K10Q02779 954 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 RRP1BQ14684 758 aaKnown RBP15.2■□□□□ 0.02
CBWD3-203ENST00000377344 RAB3GAP1Q15042 981 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 CCDC178Q5BJE1 867 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 AGXT2Q9BYV1 514 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 SENP2Q9HC62 589 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 KLF18A0A0U1RQI7 1052 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 LIFRP42702 1097 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 ATP2B2Q01814 1243 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 STK3Q13188 491 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 SEC23AQ15436 765 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 TMEM179Q6ZVK1 233 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 TMTC2Q8N394 836 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 FBXL16Q8N461 479 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 CEP95Q96GE4 821 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 TCP11L1Q9NUJ3 509 aa15.2■□□□□ 0.02
CBWD3-203ENST00000377344 PLIN4Q96Q06 1357 aa15.19■□□□□ 0.02
CBWD3-203ENST00000377344 PHF20L1A8MW92 1017 aa15.19■□□□□ 0.02
CBWD3-203ENST00000377344 PPP1R12BO60237 982 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-203ENST00000377344 CAP2P40123 477 aa15.19■□□□□ 0.02
CBWD3-203ENST00000377344 CLEC10AQ8IUN9 316 aa15.19■□□□□ 0.02
CBWD3-203ENST00000377344 WRNIP1Q96S55 665 aa15.19■□□□□ 0.02
CBWD3-203ENST00000377344 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms