RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 MYH7P12883 1935 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 CCDC69A6NI79 296 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 PRELPP51888 382 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 HAND2P61296 217 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 GRIPAP1Q4V328 841 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 TBC1D22AQ8WUA7 517 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
UBA1-202ENST00000377269 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 RAD17O75943 681 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 SCNN1DP51172 638 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 TPM4P67936 248 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 DACT2Q5SW24 774 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 UBXN6Q9BZV1 441 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 TRMT1Q9NXH9 659 aaKnown RBP16.88■□□□□ 0.29
UBA1-202ENST00000377269 SLC4A4Q9Y6R1 1079 aa16.88■□□□□ 0.29
UBA1-202ENST00000377269 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
UBA1-202ENST00000377269 BRCA1P38398 1863 aaKnown RBP16.87■□□□□ 0.29
UBA1-202ENST00000377269 GOLGA6L4A6NEF3 574 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 IARSP41252 1262 aaKnown RBP16.87■□□□□ 0.29
UBA1-202ENST00000377269 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
UBA1-202ENST00000377269 KIAA0825Q8IV33 1275 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 SCN9AQ15858 1988 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 KCNB2Q92953 911 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 RASSF4Q9H2L5 321 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 YY1AP1Q9H869 796 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 ZSWIM6Q9HCJ5 1215 aa16.87■□□□□ 0.29
UBA1-202ENST00000377269 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
UBA1-202ENST00000377269 GOLGA6L19H0YKK7 550 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 SMIM22K7EJ46 135 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
UBA1-202ENST00000377269 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
UBA1-202ENST00000377269 ATP8B1O43520 1251 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 NR1I2O75469 434 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 TUBB4AP04350 444 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 PDCP20941 246 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 STOX1Q6ZVD7 989 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 CDC37L1Q7L3B6 337 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 SPATA32Q96LK8 384 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 JAKMIP1Q96N16 626 aaKnown RBP16.86■□□□□ 0.29
UBA1-202ENST00000377269 PCDHAC2Q9Y5I4 1007 aa16.86■□□□□ 0.29
UBA1-202ENST00000377269 ZKSCAN1P17029 563 aaPredicted RBP16.85■□□□□ 0.29
UBA1-202ENST00000377269 ME3Q16798 604 aa16.85■□□□□ 0.29
UBA1-202ENST00000377269 SNW1Q13573 536 aaKnown RBP16.85■□□□□ 0.29
UBA1-202ENST00000377269 FAM173BQ6P4H8 233 aa16.85■□□□□ 0.29
UBA1-202ENST00000377269 NEK11Q8NG66 645 aa16.85■□□□□ 0.29
UBA1-202ENST00000377269 NOP2P46087 812 aaKnown RBP16.84■□□□□ 0.29
UBA1-202ENST00000377269 GSDMDP57764 484 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 EVX2Q03828 476 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 ARHGAP29Q52LW3 1261 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 FERMT3Q86UX7 667 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 SH3RF3Q8TEJ3 882 aaPredicted RBP16.84■□□□□ 0.29
UBA1-202ENST00000377269 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 RSPH14Q9UHP6 348 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
UBA1-202ENST00000377269 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.84■□□□□ 0.29
UBA1-202ENST00000377269 MROH7-TTC4A0A0A0MT08 1334 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 PSMD14O00487 310 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 DTNBO60941 627 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 LRRN4CLQ8ND94 238 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 NBPF3Q9H094 633 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 INCENPQ9NQS7 918 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 ARGLU1Q9NWB6 273 aaPredicted RBP16.84■□□□□ 0.29
UBA1-202ENST00000377269 CYP46A1Q9Y6A2 500 aa16.84■□□□□ 0.29
UBA1-202ENST00000377269 BTDP43251 543 aa16.83■□□□□ 0.28
UBA1-202ENST00000377269 TNNT3P45378 269 aaPredicted RBP16.83■□□□□ 0.28
UBA1-202ENST00000377269 TMCO3Q6UWJ1 677 aa16.83■□□□□ 0.28
UBA1-202ENST00000377269 SYT10Q6XYQ8 523 aa16.83■□□□□ 0.28
UBA1-202ENST00000377269 STK11IPQ8N1F8 1099 aa16.83■□□□□ 0.28
UBA1-202ENST00000377269 PGBD1Q96JS3 809 aa16.83■□□□□ 0.28
UBA1-202ENST00000377269 ZNRF3Q9ULT6 936 aa16.83■□□□□ 0.28
UBA1-202ENST00000377269 DAGLAQ9Y4D2 1042 aa16.83■□□□□ 0.28
UBA1-202ENST00000377269 CYP2D7A0A087X1C5 515 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 KCNJ6P48051 423 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 GSTO1P78417 241 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 SLC4A8Q2Y0W8 1093 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 NKX2-3Q8TAU0 364 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 OSBPL5Q9H0X9 879 aaPredicted RBP16.82■□□□□ 0.28
UBA1-202ENST00000377269 NAPBQ9H115 298 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.282e-22■■□□□ 11.8
UBA1-202ENST00000377269 TDO2P48775 406 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 CXCL9Q07325 125 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 E4F1Q66K89 784 aaPredicted RBP16.82■□□□□ 0.28
UBA1-202ENST00000377269 KRBA2Q6ZNG9 492 aa16.82■□□□□ 0.28
UBA1-202ENST00000377269 GPR75-ASB3A0A0A6YYF3 556 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 GNAT2P19087 354 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 GPS2Q13227 327 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 IMMTQ16891 758 aaKnown RBP16.81■□□□□ 0.28
UBA1-202ENST00000377269 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
UBA1-202ENST00000377269 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms