RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 RNF41Q9H4P4 317 aaPredicted RBP18.61■□□□□ 0.57
TRIM27-202ENST00000377199 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
TRIM27-202ENST00000377199 KLRK1P26718 216 aa18.61■□□□□ 0.57
TRIM27-202ENST00000377199 IFIT1BQ5T764 474 aaKnown RBP18.61■□□□□ 0.57
TRIM27-202ENST00000377199 SAMSN1Q9NSI8 373 aaKnown RBP18.61■□□□□ 0.57
TRIM27-202ENST00000377199 TFCP2L1Q9NZI6 479 aa18.61■□□□□ 0.57
TRIM27-202ENST00000377199 CBFA2T2O43439 604 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 KMT5BQ4FZB7 885 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 FAM47AQ5JRC9 791 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
TRIM27-202ENST00000377199 SHISA4Q96DD7 197 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 CGNQ9P2M7 1197 aaKnown RBP18.6■□□□□ 0.57
TRIM27-202ENST00000377199 HOOK1Q9UJC3 728 aaKnown RBP18.6■□□□□ 0.57
TRIM27-202ENST00000377199 WNT7AO00755 349 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 ZNF174Q15697 407 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 ANKRD18AQ8IVF6 992 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 INTS13Q9NVM9 706 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 STK36Q9NRP7 1315 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 ZSCAN20P17040 1043 aaPredicted RBP18.6■□□□□ 0.57
TRIM27-202ENST00000377199 PTPREP23469 700 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 CPLX3Q8WVH0 158 aa18.6■□□□□ 0.57
TRIM27-202ENST00000377199 URI1O94763 535 aaPredicted RBP18.59■□□□□ 0.57
TRIM27-202ENST00000377199 FBXO38Q6PIJ6 1188 aa18.59■□□□□ 0.57
TRIM27-202ENST00000377199 FOXP1Q9H334 677 aaPredicted RBP18.59■□□□□ 0.57
TRIM27-202ENST00000377199 ABCA3Q99758 1704 aa18.59■□□□□ 0.57
TRIM27-202ENST00000377199 MARCH10Q8NA82 808 aaPredicted RBP18.59■□□□□ 0.57
TRIM27-202ENST00000377199 AATFQ9NY61 560 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRIM27-202ENST00000377199 USP17L12C9JPN9 530 aa18.58■□□□□ 0.57
TRIM27-202ENST00000377199 USP17L21D6R901 530 aa18.58■□□□□ 0.57
TRIM27-202ENST00000377199 PARP10Q53GL7 1025 aa18.58■□□□□ 0.57
TRIM27-202ENST00000377199 VSTM4Q8IW00 320 aa18.58■□□□□ 0.57
TRIM27-202ENST00000377199 CELF1Q92879 486 aaKnown RBP18.58■□□□□ 0.57
TRIM27-202ENST00000377199 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.57
TRIM27-202ENST00000377199 PNPLA7Q6ZV29 1317 aa18.58■□□□□ 0.57
TRIM27-202ENST00000377199 MDM2Q00987 491 aaPredicted RBP18.58■□□□□ 0.56
TRIM27-202ENST00000377199 CAVIN4Q5BKX8 364 aa18.58■□□□□ 0.56
TRIM27-202ENST00000377199 ZSCAN10Q96SZ4 725 aaPredicted RBP18.58■□□□□ 0.56
TRIM27-202ENST00000377199 DESI2Q9BSY9 194 aa18.58■□□□□ 0.56
TRIM27-202ENST00000377199 A0A087X0B3 334 aa18.57■□□□□ 0.56
TRIM27-202ENST00000377199 CATIPQ7Z7H3 387 aa18.57■□□□□ 0.56
TRIM27-202ENST00000377199 ERO1AQ96HE7 468 aa18.57■□□□□ 0.56
TRIM27-202ENST00000377199 GNL3LQ9NVN8 582 aaKnown RBP18.57■□□□□ 0.56
TRIM27-202ENST00000377199 VWA3AA6NCI4 1184 aa18.57■□□□□ 0.56
TRIM27-202ENST00000377199 TRIM75PA6NK02 468 aa18.57■□□□□ 0.56
TRIM27-202ENST00000377199 TMTC2Q8N394 836 aa18.57■□□□□ 0.56
TRIM27-202ENST00000377199 GOLGB1Q14789 3259 aaKnown RBP18.57■□□□□ 0.56
TRIM27-202ENST00000377199 XBP1P17861 261 aa18.56■□□□□ 0.56
TRIM27-202ENST00000377199 IQCA1Q86XH1 822 aa18.56■□□□□ 0.56
TRIM27-202ENST00000377199 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
TRIM27-202ENST00000377199 PSDA5PKW4 1024 aaPredicted RBP18.56■□□□□ 0.56
TRIM27-202ENST00000377199 CYP2D6P10635 497 aa18.56■□□□□ 0.56
TRIM27-202ENST00000377199 SEC23AQ15436 765 aa18.56■□□□□ 0.56
TRIM27-202ENST00000377199 SYMPKQ92797 1274 aaKnown RBP18.56■□□□□ 0.56
TRIM27-202ENST00000377199 COL4A1P02462 1669 aa18.56■□□□□ 0.56
TRIM27-202ENST00000377199 VEGFAP15692 232 aaPredicted RBP18.55■□□□□ 0.56
TRIM27-202ENST00000377199 KRT2P35908 639 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 SLC51AQ86UW1 340 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 AK7Q96M32 723 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 CEP131Q9UPN4 1083 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 SRPRBQ9Y5M8 271 aaKnown RBP18.55■□□□□ 0.56
TRIM27-202ENST00000377199 FAM237AA0A1B0GTK4 181 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 KIF2AO00139 706 aaPredicted RBP18.55■□□□□ 0.56
TRIM27-202ENST00000377199 PKN1Q16512 942 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 BAG1Q99933 345 aaPredicted RBP18.55■□□□□ 0.56
TRIM27-202ENST00000377199 RIOK1Q9BRS2 568 aaKnown RBP18.55■□□□□ 0.56
TRIM27-202ENST00000377199 EPC1Q9H2F5 836 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 BLZF1Q9H2G9 400 aa18.55■□□□□ 0.56
TRIM27-202ENST00000377199 ACTN4O43707 911 aaKnown RBP18.54■□□□□ 0.56
TRIM27-202ENST00000377199 CDC25AP30304 524 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 ETF1P62495 437 aaKnown RBP18.54■□□□□ 0.56
TRIM27-202ENST00000377199 KARSQ15046 597 aaKnown RBP18.54■□□□□ 0.56
TRIM27-202ENST00000377199 TOGARAM2Q6ZUX3 1019 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 ZNF397Q8NF99 534 aaPredicted RBP18.54■□□□□ 0.56
TRIM27-202ENST00000377199 ZNF384Q8TF68 577 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 MED15Q96RN5 788 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
TRIM27-202ENST00000377199 PRDX5P30044 214 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 ZBTB9Q96C00 473 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 OGFRQ9NZT2 677 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 MINPP1Q9UNW1 487 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 FANCGO15287 622 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 MTF1Q14872 753 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 SYCP1Q15431 976 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 ARHGAP29Q52LW3 1261 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 PIK3AP1Q6ZUJ8 805 aa18.54■□□□□ 0.56
TRIM27-202ENST00000377199 FAM84BQ96KN1 310 aaPredicted RBP18.54■□□□□ 0.56
TRIM27-202ENST00000377199 RNF26Q9BY78 433 aaPredicted RBP18.54■□□□□ 0.56
TRIM27-202ENST00000377199 ECM29Q5VYK3 1845 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 TEX33O43247 280 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 MCM7P33993 719 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 GNG11P61952 73 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 MNS1Q8NEH6 495 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 PRDM4Q9UKN5 801 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 MAPK8IP1Q9UQF2 711 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.53■□□□□ 0.566e-13■□□□□ 9.2
TRIM27-202ENST00000377199 TAF1P21675 1872 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 ADAMTS3O15072 1205 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms