RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 CEP131Q9UPN4 1083 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 GNAT2P19087 354 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 FGFR2P21802 821 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 RASGRP4Q8TDF6 673 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 KRT2P35908 639 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 GPIHBP1Q8IV16 184 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 ZNF397Q8NF99 534 aaPredicted RBP14.75□□□□□ -0.05
USP11-204ENST00000377107 KCPQ6ZWJ8 1503 aa14.75□□□□□ -0.05
USP11-204ENST00000377107 ERVV-1B6SEH8 477 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 MTF1Q14872 753 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 TMTC2Q8N394 836 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 ENAHQ8N8S7 591 aaPredicted RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 CELF1Q92879 486 aaKnown RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 ZSCAN10Q96SZ4 725 aaPredicted RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 IRX2Q9BZI1 471 aaPredicted RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 MCM9Q9NXL9 1143 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 KIF1AQ12756 1690 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 KIF2AO00139 706 aaPredicted RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 IKBKBO14920 756 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 ETF1P62495 437 aaKnown RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 FBXL16Q8N461 479 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 GPKOWQ92917 476 aaPredicted RBP eCLIP14.74□□□□□ -0.05
USP11-204ENST00000377107 PHRF1Q9P1Y6 1649 aaKnown RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 TEX33O43247 280 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 CASQ1P31415 396 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 RRAGBQ5VZM2 374 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 CCDC12Q8WUD4 166 aaPredicted RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 TIGD1Q96MW7 591 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 VPS16Q9H269 839 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 VAT1LQ9HCJ6 419 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 OGFRQ9NZT2 677 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 TUBE1Q9UJT0 475 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 FBXO2Q9UK22 296 aaPredicted RBP14.74□□□□□ -0.05
USP11-204ENST00000377107 STX8Q9UNK0 236 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 HPSEQ9Y251 543 aa14.74□□□□□ -0.05
USP11-204ENST00000377107 ZSCAN20P17040 1043 aaPredicted RBP14.73□□□□□ -0.05
USP11-204ENST00000377107 PTPREP23469 700 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 INTS5Q6P9B9 1019 aaKnown RBP14.73□□□□□ -0.05
USP11-204ENST00000377107 ZNF652Q9Y2D9 606 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 ZSCAN12O43309 604 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 DZIP1Q86YF9 867 aaKnown RBP14.73□□□□□ -0.05
USP11-204ENST00000377107 VSTM4Q8IW00 320 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 STAG1Q8WVM7 1258 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 ANKIB1Q9P2G1 1089 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 CTNND2Q9UQB3 1225 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP11-204ENST00000377107 ABCC12Q96J65 1359 aa14.73□□□□□ -0.05
USP11-204ENST00000377107 RAD21O60216 631 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 PRDX5P30044 214 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 USP5P45974 858 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 PTGDRQ13258 359 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 GPR101Q96P66 508 aaPredicted RBP14.72□□□□□ -0.05
USP11-204ENST00000377107 SRP68Q9UHB9 627 aaKnown RBP14.72□□□□□ -0.05
USP11-204ENST00000377107 PPP2R2CQ9Y2T4 447 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 ALS2Q96Q42 1657 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 WNT7AO00755 349 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 VEGFAP15692 232 aaPredicted RBP14.72□□□□□ -0.05
USP11-204ENST00000377107 NBPF5PQ86XG9 351 aaPredicted RBP14.72□□□□□ -0.05
USP11-204ENST00000377107 PUF60Q9UHX1 559 aaKnown RBP14.72□□□□□ -0.05
USP11-204ENST00000377107 WDR19Q8NEZ3 1342 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 SEC31AO94979 1220 aaKnown RBP14.72□□□□□ -0.05
USP11-204ENST00000377107 FAM98CQ17RN3 349 aaKnown RBP14.72□□□□□ -0.05
USP11-204ENST00000377107 BPIFA3Q9BQP9 254 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 HSD3B7Q9H2F3 369 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 MKNK2Q9HBH9 465 aa14.72□□□□□ -0.05
USP11-204ENST00000377107 ALX1Q15699 326 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 PARP10Q53GL7 1025 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 TTC38Q5R3I4 469 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 SPECC1LQ69YQ0 1117 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 FOXP1Q9H334 677 aaPredicted RBP14.71□□□□□ -0.05
USP11-204ENST00000377107 CPVLQ9H3G5 476 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
USP11-204ENST00000377107 SAP30BPQ9UHR5 308 aaKnown RBP14.71□□□□□ -0.05
USP11-204ENST00000377107 SOWAHDA6NJG2 315 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 N4BP3O15049 544 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 CAMTA2O94983 1202 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 FILIP1LQ4L180 1135 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 IGSF22Q8N9C0 903 aa14.71□□□□□ -0.05
USP11-204ENST00000377107 PCMTD1Q96MG8 357 aaPredicted RBP14.71□□□□□ -0.05
USP11-204ENST00000377107 LAMA4Q16363 1823 aa14.71□□□□□ -0.06
USP11-204ENST00000377107 TICAM2Q86XR7 235 aa14.71□□□□□ -0.06
USP11-204ENST00000377107 KRT222Q8N1A0 295 aa14.71□□□□□ -0.06
USP11-204ENST00000377107 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.06
USP11-204ENST00000377107 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.71□□□□□ -0.06
USP11-204ENST00000377107 CCP110O43303 1012 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 ERCC3P19447 782 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 MLKLQ8NB16 471 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 DYNLL2Q96FJ2 89 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 UIMC1Q96RL1 719 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 WDR24Q96S15 920 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 FEZ1Q99689 392 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 A0A087X0B3 334 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 PSDA5PKW4 1024 aaPredicted RBP14.7□□□□□ -0.06
USP11-204ENST00000377107 USP17L8P0C7I0 530 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 GOLGA8HP0CJ92 632 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms