RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 RNF26Q9BY78 433 aaPredicted RBP25.05■■□□□ 1.6
RNF39-202ENST00000376751 QTRT2Q9H974 415 aaKnown RBP25.05■■□□□ 1.6
RNF39-202ENST00000376751 KIAA1468Q9P260 1216 aa25.05■■□□□ 1.6
RNF39-202ENST00000376751 LDHBP07195 334 aaKnown RBP25.04■■□□□ 1.6
RNF39-202ENST00000376751 USP17L8P0C7I0 530 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 SLC4A8Q2Y0W8 1093 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 C15orf52Q6ZUT6 534 aaKnown RBP25.04■■□□□ 1.6
RNF39-202ENST00000376751 JMYQ8N9B5 988 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 WDR66Q8TBY9 1149 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 TRIM5Q9C035 493 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 FOXP1Q9H334 677 aaPredicted RBP25.04■■□□□ 1.6
RNF39-202ENST00000376751 NAV1Q8NEY1 1877 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 hCG_1642624A0A1W2PR95 340 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 DDR1Q08345 913 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 DIXDC1Q155Q3 683 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 ZNF804AQ7Z570 1209 aa25.04■■□□□ 1.6
RNF39-202ENST00000376751 MKRN1Q9UHC7 482 aaKnown RBP25.04■■□□□ 1.6
RNF39-202ENST00000376751 FAM237AA0A1B0GTK4 181 aa25.03■■□□□ 1.6
RNF39-202ENST00000376751 PPP2R5BQ15173 497 aa25.03■■□□□ 1.6
RNF39-202ENST00000376751 RESP18Q5W5W9 173 aa25.03■■□□□ 1.6
RNF39-202ENST00000376751 C17orf53Q8N3J3 647 aaPredicted RBP25.03■■□□□ 1.6
RNF39-202ENST00000376751 SH3RF3Q8TEJ3 882 aaPredicted RBP25.03■■□□□ 1.6
RNF39-202ENST00000376751 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.03■■□□□ 1.6
RNF39-202ENST00000376751 DDAH1O94760 285 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 ST5P78524 1137 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 CEP57L1Q8IYX8 460 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 CDK5RAP2Q96SN8 1893 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 MCM9Q9NXL9 1143 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 CUTAO60888 179 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 UFL1O94874 794 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 TRIM37O94972 964 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 SLC3A2P08195 630 aaKnown RBP25.02■■□□□ 1.6
RNF39-202ENST00000376751 DPCR1Q3MIW9 517 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 SLC27A3Q5K4L6 730 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 PIBF1Q8WXW3 757 aa25.02■■□□□ 1.6
RNF39-202ENST00000376751 BAZ2BQ9UIF8 2168 aaKnown RBP25.01■■□□□ 1.59
RNF39-202ENST00000376751 GOLGA6L19H0YKK7 550 aa25.01■■□□□ 1.59
RNF39-202ENST00000376751 PTGS1P23219 599 aa25.01■■□□□ 1.59
RNF39-202ENST00000376751 SYKP43405 635 aa25.01■■□□□ 1.59
RNF39-202ENST00000376751 TMTC3Q6ZXV5 915 aa25.01■■□□□ 1.59
RNF39-202ENST00000376751 VPS54Q9P1Q0 977 aa25.01■■□□□ 1.59
RNF39-202ENST00000376751 PRPF3O43395 683 aaKnown RBP25■■□□□ 1.59
RNF39-202ENST00000376751 SARM1Q6SZW1 724 aa25■■□□□ 1.59
RNF39-202ENST00000376751 AOPEPQ8N6M6 819 aa25■■□□□ 1.59
RNF39-202ENST00000376751 RBM28Q9NW13 759 aaKnown RBP25■■□□□ 1.59
RNF39-202ENST00000376751 CNTNAP5Q8WYK1 1306 aa25■■□□□ 1.59
RNF39-202ENST00000376751 FAM205CA6NFA0 338 aa25■■□□□ 1.59
RNF39-202ENST00000376751 TIGD1Q96MW7 591 aa25■■□□□ 1.59
RNF39-202ENST00000376751 NRBP1Q9UHY1 535 aa25■■□□□ 1.59
RNF39-202ENST00000376751 PYCARDQ9ULZ3 195 aa25■■□□□ 1.59
RNF39-202ENST00000376751 PCDHB6Q9Y5E3 794 aa25■■□□□ 1.59
RNF39-202ENST00000376751 V9GY48 417 aaPredicted RBP25■■□□□ 1.59
RNF39-202ENST00000376751 GOLGA6L6A8MZA4 724 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 BIN1O00499 593 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 CALM1P0DP23 149 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 CALM2P0DP24 149 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 CALM3P0DP25 149 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 AKAP17AQ02040 695 aaKnown RBP24.99■■□□□ 1.59
RNF39-202ENST00000376751 GRIN1Q05586 938 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 C12orf60Q5U649 245 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.99■■□□□ 1.59
RNF39-202ENST00000376751 RBM17Q96I25 401 aaKnown RBP24.99■■□□□ 1.59
RNF39-202ENST00000376751 LTBP1Q14766 1721 aa24.99■■□□□ 1.59
RNF39-202ENST00000376751 POLRMTO00411 1230 aaKnown RBP24.98■■□□□ 1.59
RNF39-202ENST00000376751 PDE4BQ07343 736 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 RCSD1Q6JBY9 416 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 KRT27Q7Z3Y8 459 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 KRI1Q8N9T8 703 aaKnown RBP24.98■■□□□ 1.59
RNF39-202ENST00000376751 DYNLL2Q96FJ2 89 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 PHF20Q9BVI0 1012 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 CD209Q9NNX6 404 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 LRRC37AA6NMS7 1700 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 TPM3P06753 285 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 USP5P45974 858 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 RILPL1Q5EBL4 403 aa24.98■■□□□ 1.59
RNF39-202ENST00000376751 SRBD1Q8N5C6 995 aaKnown RBP24.98■■□□□ 1.59
RNF39-202ENST00000376751 ANO8Q9HCE9 1232 aaPredicted RBP24.98■■□□□ 1.59
RNF39-202ENST00000376751 FBXO2Q9UK22 296 aaPredicted RBP24.98■■□□□ 1.59
RNF39-202ENST00000376751 BECN2A8MW95 431 aa24.97■■□□□ 1.59
RNF39-202ENST00000376751 ATP2B4P23634 1241 aa24.97■■□□□ 1.59
RNF39-202ENST00000376751 GGA1Q9UJY5 639 aa24.97■■□□□ 1.59
RNF39-202ENST00000376751 ANKRD31Q8N7Z5 1873 aa24.97■■□□□ 1.59
RNF39-202ENST00000376751 ROBO3Q96MS0 1386 aa24.97■■□□□ 1.59
RNF39-202ENST00000376751 TSPY2A6NKD2 308 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 CDC25BP30305 580 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 NLRP12P59046 1061 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 GSTO1P78417 241 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 EARS2Q5JPH6 523 aaKnown RBP24.96■■□□□ 1.59
RNF39-202ENST00000376751 SPECC1Q5M775 1068 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 CCDC186Q7Z3E2 898 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 PROM2Q8N271 834 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 RTFDC1Q9BY42 306 aaPredicted RBP24.96■■□□□ 1.59
RNF39-202ENST00000376751 HOXA10P31260 410 aaPredicted RBP24.96■■□□□ 1.59
RNF39-202ENST00000376751 PPP4CP60510 307 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 DRC7Q8IY82 874 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 CABP5Q9NP86 173 aa24.96■■□□□ 1.59
RNF39-202ENST00000376751 DDX60LQ5H9U9 1706 aaKnown RBP24.96■■□□□ 1.59
RNF39-202ENST00000376751 IGSF3O75054 1194 aa24.95■■□□□ 1.58
RNF39-202ENST00000376751 IL1R1P14778 569 aa24.95■■□□□ 1.58
RNF39-202ENST00000376751 PTPREP23469 700 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms