RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ZNF396Q96N95 335 aaPredicted RBP15.02□□□□□ -0.01
TRIM40-206ENST00000376724 USP28Q96RU2 1077 aa15.02□□□□□ -0.01
TRIM40-206ENST00000376724 KIF28PB7ZC32 967 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 DPEP1P16444 411 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 MRE11P49959 708 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 RCAN1P53805 252 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 GNL2Q13823 731 aaKnown RBP15.01□□□□□ -0.01
TRIM40-206ENST00000376724 CRACR2BQ8N4Y2 399 aaPredicted RBP15.01□□□□□ -0.01
TRIM40-206ENST00000376724 SLC16A10Q8TF71 515 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 USP40Q9NVE5 1235 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 C10orf71Q711Q0 1435 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 CDK5RAP2Q96SN8 1893 aa15.01□□□□□ -0.01
TRIM40-206ENST00000376724 ROBO3Q96MS0 1386 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 USP17L3A6NCW0 530 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 USP17L4A6NCW7 530 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 PPIP5K2O43314 1243 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
TRIM40-206ENST00000376724 TROAPQ12815 778 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 USP17L1Q7RTZ2 530 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 NBPF11Q86T75 865 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 IL17RBQ9NRM6 502 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 ISY1Q9ULR0 285 aaKnown RBP15□□□□□ -0.01
TRIM40-206ENST00000376724 STK36Q9NRP7 1315 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 CALM1P0DP23 149 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 CALM2P0DP24 149 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 CALM3P0DP25 149 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 CDK8P49336 464 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.01
TRIM40-206ENST00000376724 STRIP1Q5VSL9 837 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 WASF1Q92558 559 aa15□□□□□ -0.01
TRIM40-206ENST00000376724 ATF5Q9Y2D1 282 aaPredicted RBP15□□□□□ -0.01
TRIM40-206ENST00000376724 DDAH1O94760 285 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 PLEKHA8P1O95397 391 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 RASA1P20936 1047 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 CRKP46108 304 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 AKAP17AQ02040 695 aaKnown RBP14.99□□□□□ -0.01
TRIM40-206ENST00000376724 KIAA2012Q0VF49 1180 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 PPP2R5BQ15173 497 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 DACT2Q5SW24 774 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 CCDC183Q5T5S1 534 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 SUPT20HQ8NEM7 779 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 PGBD1Q96JS3 809 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 KAT14Q9H8E8 782 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 ZNF287Q9HBT7 754 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
TRIM40-206ENST00000376724 hCG_1642624A0A1W2PR95 340 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 DEXIO95424 95 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 RCSD1Q6JBY9 416 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 APOBEC3HQ6NTF7 200 aaKnown RBP14.99□□□□□ -0.01
TRIM40-206ENST00000376724 CDC42EP5Q6NZY7 148 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 LRSAM1Q6UWE0 723 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 HHIPL2Q6UWX4 724 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 C16orf86Q6ZW13 317 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 BRAPQ7Z569 592 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 CTCFLQ8NI51 663 aaPredicted RBP14.99□□□□□ -0.01
TRIM40-206ENST00000376724 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 PANK2Q9BZ23 570 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 RBM28Q9NW13 759 aaKnown RBP14.99□□□□□ -0.01
TRIM40-206ENST00000376724 KCNJ14Q9UNX9 436 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 MTMR7Q9Y216 660 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
TRIM40-206ENST00000376724 ADAMTSL1Q8N6G6 1762 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
TRIM40-206ENST00000376724 LIG1P18858 919 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 KCNA3P22001 575 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 CCDC93Q567U6 631 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 MYSM1Q5VVJ2 828 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 ATL3Q6DD88 541 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 STX8Q9UNK0 236 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 ECM29Q5VYK3 1845 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 MYH15Q9Y2K3 1946 aa14.98□□□□□ -0.01
TRIM40-206ENST00000376724 DLEC1Q9Y238 1755 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 DGKHQ86XP1 1220 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 RCOR1Q9UKL0 485 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 CLIC4Q9Y696 253 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 V9GY48 417 aaPredicted RBP14.97□□□□□ -0.01
TRIM40-206ENST00000376724 MYH1P12882 1939 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 SCN9AQ15858 1988 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 SNED1Q8TER0 1413 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 CACNB3P54284 484 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 PNMA1Q8ND90 353 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 PIBF1Q8WXW3 757 aa14.97□□□□□ -0.01
TRIM40-206ENST00000376724 RNF26Q9BY78 433 aaPredicted RBP14.97□□□□□ -0.01
TRIM40-206ENST00000376724 PPP1R1BQ9UD71 204 aaPredicted RBP14.97□□□□□ -0.01
TRIM40-206ENST00000376724 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
TRIM40-206ENST00000376724 ME1P48163 572 aa14.96□□□□□ -0.01
TRIM40-206ENST00000376724 TMTC3Q6ZXV5 915 aa14.96□□□□□ -0.01
TRIM40-206ENST00000376724 RTKN2Q8IZC4 609 aa14.96□□□□□ -0.01
TRIM40-206ENST00000376724 ZNF277Q9NRM2 450 aaPredicted RBP14.96□□□□□ -0.01
TRIM40-206ENST00000376724 FUT2Q10981 343 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 NFIAQ12857 509 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 STK38Q15208 465 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 SAFBQ15424 915 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 CAMK4Q16566 473 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 SRBD1Q8N5C6 995 aaKnown RBP14.95□□□□□ -0.02
TRIM40-206ENST00000376724 RGS22Q8NE09 1264 aa14.95□□□□□ -0.02
TRIM40-206ENST00000376724 ZDHHC15Q96MV8 337 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms