RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SIPA1L1O43166 1804 aa25.6■■□□□ 1.69
VSX1-201ENST00000376707 MYO5AQ9Y4I1 1855 aaKnown RBP25.6■■□□□ 1.69
VSX1-201ENST00000376707 MKI67P46013 3256 aaKnown RBP25.59■■□□□ 1.69
VSX1-201ENST00000376707 JAG1P78504 1218 aa25.59■■□□□ 1.69
VSX1-201ENST00000376707 RNF208Q9H0X6 261 aa25.59■■□□□ 1.69
VSX1-201ENST00000376707 ASCC2Q9H1I8 757 aaPredicted RBP25.59■■□□□ 1.69
VSX1-201ENST00000376707 ZBTB21Q9ULJ3 1066 aa25.59■■□□□ 1.69
VSX1-201ENST00000376707 LOC285556D6RIA3 1793 aa25.59■■□□□ 1.69
VSX1-201ENST00000376707 TTF1Q15361 905 aaPredicted RBP25.58■■□□□ 1.69
VSX1-201ENST00000376707 BCL11AQ9H165 835 aa25.58■■□□□ 1.69
VSX1-201ENST00000376707 CHMP4BQ9H444 224 aaKnown RBP25.58■■□□□ 1.69
VSX1-201ENST00000376707 FOCADQ5VW36 1801 aa25.58■■□□□ 1.68
VSX1-201ENST00000376707 GJB1P08034 283 aa25.57■■□□□ 1.68
VSX1-201ENST00000376707 IFIT2P09913 472 aaKnown RBP25.57■■□□□ 1.68
VSX1-201ENST00000376707 IRX3P78415 501 aaPredicted RBP25.57■■□□□ 1.68
VSX1-201ENST00000376707 IRF5Q13568 498 aa25.57■■□□□ 1.68
VSX1-201ENST00000376707 SHROOM1Q2M3G4 852 aaPredicted RBP25.57■■□□□ 1.68
VSX1-201ENST00000376707 SHISA4Q96DD7 197 aa25.57■■□□□ 1.68
VSX1-201ENST00000376707 TAOK2Q9UL54 1235 aa25.57■■□□□ 1.68
VSX1-201ENST00000376707 MGAMO43451 1857 aa25.57■■□□□ 1.68
VSX1-201ENST00000376707 CDK5RAP2Q96SN8 1893 aa25.57■■□□□ 1.68
VSX1-201ENST00000376707 C19orf81C9J6K1 198 aa25.56■■□□□ 1.68
VSX1-201ENST00000376707 USP17L10C9JJH3 530 aa25.56■■□□□ 1.68
VSX1-201ENST00000376707 ELNP15502 786 aa25.56■■□□□ 1.68
VSX1-201ENST00000376707 PXYLP1Q8TE99 480 aa25.56■■□□□ 1.68
VSX1-201ENST00000376707 GJA8P48165 433 aa25.55■■□□□ 1.68
VSX1-201ENST00000376707 TTC6Q86TZ1 520 aa25.55■■□□□ 1.68
VSX1-201ENST00000376707 SIRT2Q8IXJ6 389 aa25.55■■□□□ 1.68
VSX1-201ENST00000376707 SERPINB13Q9UIV8 391 aa25.55■■□□□ 1.68
VSX1-201ENST00000376707 RAB11FIP3O75154 756 aa25.54■■□□□ 1.68
VSX1-201ENST00000376707 INHAP05111 366 aa25.54■■□□□ 1.68
VSX1-201ENST00000376707 SLC9C2Q5TAH2 1124 aa25.54■■□□□ 1.68
VSX1-201ENST00000376707 DNAJC2Q99543 621 aaKnown RBP25.54■■□□□ 1.68
VSX1-201ENST00000376707 UNC93B1Q9H1C4 597 aa25.54■■□□□ 1.68
VSX1-201ENST00000376707 EHD4Q9H223 541 aa25.54■■□□□ 1.68
VSX1-201ENST00000376707 MAGEB6P1A0A0J9YX57 407 aa25.53■■□□□ 1.68
VSX1-201ENST00000376707 GOLIM4O00461 696 aa25.53■■□□□ 1.68
VSX1-201ENST00000376707 GH2P01242 217 aa25.53■■□□□ 1.68
VSX1-201ENST00000376707 HOXA7P31268 230 aaPredicted RBP25.53■■□□□ 1.68
VSX1-201ENST00000376707 PDE3AQ14432 1141 aa25.53■■□□□ 1.68
VSX1-201ENST00000376707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.53■■□□□ 1.68
VSX1-201ENST00000376707 RIOK1Q9BRS2 568 aaKnown RBP25.53■■□□□ 1.68
VSX1-201ENST00000376707 PDE6AP16499 860 aa25.52■■□□□ 1.68
VSX1-201ENST00000376707 TATDN1Q6P1N9 297 aa25.52■■□□□ 1.68
VSX1-201ENST00000376707 U2AF1L4Q8WU68 220 aaKnown RBP25.52■■□□□ 1.68
VSX1-201ENST00000376707 MORF4L1Q9UBU8 362 aa25.52■■□□□ 1.68
VSX1-201ENST00000376707 P2RX7Q99572 595 aaKnown RBP25.51■■□□□ 1.67
VSX1-201ENST00000376707 CRNKL1Q9BZJ0 848 aaKnown RBP25.51■■□□□ 1.67
VSX1-201ENST00000376707 HERVK_113P62684 666 aa25.5■■□□□ 1.67
VSX1-201ENST00000376707 CERKLQ49MI3 558 aaPredicted RBP25.5■■□□□ 1.67
VSX1-201ENST00000376707 USP17L2Q6R6M4 530 aa25.5■■□□□ 1.67
VSX1-201ENST00000376707 FEZ1Q99689 392 aa25.5■■□□□ 1.67
VSX1-201ENST00000376707 ZNF532Q9HCE3 1301 aa25.5■■□□□ 1.67
VSX1-201ENST00000376707 SGPL1O95470 568 aa25.49■■□□□ 1.67
VSX1-201ENST00000376707 POLR3DP05423 398 aaPredicted RBP25.49■■□□□ 1.67
VSX1-201ENST00000376707 RAB3GAP1Q15042 981 aa25.49■■□□□ 1.67
VSX1-201ENST00000376707 C20orf194Q5TEA3 1177 aa25.49■■□□□ 1.67
VSX1-201ENST00000376707 EMILIN3Q9NT22 766 aa25.49■■□□□ 1.67
VSX1-201ENST00000376707 MYH1P12882 1939 aa25.49■■□□□ 1.67
VSX1-201ENST00000376707 PLCD1P51178 756 aa25.48■■□□□ 1.67
VSX1-201ENST00000376707 ABCB5Q2M3G0 1257 aa25.48■■□□□ 1.67
VSX1-201ENST00000376707 HABP4Q5JVS0 413 aaKnown RBP25.48■■□□□ 1.67
VSX1-201ENST00000376707 GPRC5AQ8NFJ5 357 aa25.48■■□□□ 1.67
VSX1-201ENST00000376707 CABP5Q9NP86 173 aa25.48■■□□□ 1.67
VSX1-201ENST00000376707 ZYXQ15942 572 aaKnown RBP25.47■■□□□ 1.67
VSX1-201ENST00000376707 DPF3Q92784 378 aa25.47■■□□□ 1.67
VSX1-201ENST00000376707 EDC3Q96F86 508 aaKnown RBP25.47■■□□□ 1.67
VSX1-201ENST00000376707 BOLA2Q9H3K6 86 aa25.47■■□□□ 1.67
VSX1-201ENST00000376707 PAG1Q9NWQ8 432 aa25.47■■□□□ 1.67
VSX1-201ENST00000376707 MCM9Q9NXL9 1143 aa25.47■■□□□ 1.67
VSX1-201ENST00000376707 TCRBV5S4A2TA0A5A2 114 aa25.46■■□□□ 1.67
VSX1-201ENST00000376707 FARP2O94887 1054 aaPredicted RBP25.46■■□□□ 1.67
VSX1-201ENST00000376707 UBE2Q1Q7Z7E8 422 aa25.46■■□□□ 1.67
VSX1-201ENST00000376707 GTF3C2Q8WUA4 911 aaPredicted RBP25.46■■□□□ 1.67
VSX1-201ENST00000376707 DEFB118Q96PH6 123 aa25.46■■□□□ 1.67
VSX1-201ENST00000376707 HTATIP2Q9BUP3 242 aa25.46■■□□□ 1.67
VSX1-201ENST00000376707 TXNRD2Q9NNW7 524 aa25.46■■□□□ 1.67
VSX1-201ENST00000376707 GJD2Q9UKL4 321 aa25.46■■□□□ 1.67
VSX1-201ENST00000376707 H0YGN5 161 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 PEX10O60683 326 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 TFRCP02786 760 aaKnown RBP25.45■■□□□ 1.66
VSX1-201ENST00000376707 HMGCRP04035 888 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 ATP5JP18859 108 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 SHMT1P34896 483 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 USP14P54578 494 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 CCAR1Q8IX12 1150 aaKnown RBP25.45■■□□□ 1.66
VSX1-201ENST00000376707 LCORLQ8N3X6 602 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 C12orf42Q96LP6 360 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 PAGR1Q9BTK6 254 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 PAK6Q9NQU5 681 aaPredicted RBP25.45■■□□□ 1.66
VSX1-201ENST00000376707 RBPJLQ9UBG7 517 aa25.45■■□□□ 1.66
VSX1-201ENST00000376707 CAPN2P17655 700 aa25.44■■□□□ 1.66
VSX1-201ENST00000376707 SDR42E1Q8WUS8 393 aa25.44■■□□□ 1.66
VSX1-201ENST00000376707 KIAA1683Q9H0B3 1180 aa25.44■■□□□ 1.66
VSX1-201ENST00000376707 USP17L15C9J2P7 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 USP17L13C9JLJ4 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 USP17L11C9JVI0 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 USP17L18D6R9N7 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 USP17L22D6RA61 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 USP17L17D6RBQ6 530 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms