RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 DOCK3Q8IZD9 2030 aa17.2■□□□□ 0.34
CLCN6-203ENST00000376490 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
CLCN6-203ENST00000376490 IGHDP01880 384 aa17.2■□□□□ 0.34
CLCN6-203ENST00000376490 ASNSP08243 561 aa17.2■□□□□ 0.34
CLCN6-203ENST00000376490 CYP2D6P10635 497 aa17.2■□□□□ 0.34
CLCN6-203ENST00000376490 MX1P20591 662 aa17.2■□□□□ 0.34
CLCN6-203ENST00000376490 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
CLCN6-203ENST00000376490 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
CLCN6-203ENST00000376490 EFCC1Q9HA90 598 aa17.2■□□□□ 0.34
CLCN6-203ENST00000376490 AS3MTQ9HBK9 375 aa17.2■□□□□ 0.34
CLCN6-203ENST00000376490 ERC2O15083 957 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 HMGCS2P54868 508 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 TREML2Q5T2D2 321 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 WDR18Q9BV38 432 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 ARHGAP39Q9C0H5 1083 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 ADGRA2Q96PE1 1338 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 SALL3Q9BXA9 1300 aa17.19■□□□□ 0.34
CLCN6-203ENST00000376490 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
CLCN6-203ENST00000376490 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
CLCN6-203ENST00000376490 GH2P01242 217 aa17.18■□□□□ 0.34
CLCN6-203ENST00000376490 SHMT1P34896 483 aa17.18■□□□□ 0.34
CLCN6-203ENST00000376490 CERKLQ49MI3 558 aaPredicted RBP17.18■□□□□ 0.34
CLCN6-203ENST00000376490 GINM1Q9NU53 330 aa17.18■□□□□ 0.34
CLCN6-203ENST00000376490 AGTPBP1Q9UPW5 1226 aa17.18■□□□□ 0.34
CLCN6-203ENST00000376490 PTPN22Q9Y2R2 807 aa17.18■□□□□ 0.34
CLCN6-203ENST00000376490 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
CLCN6-203ENST00000376490 SMIM22K7EJ46 135 aa17.17■□□□□ 0.34
CLCN6-203ENST00000376490 BACE1P56817 501 aa17.17■□□□□ 0.34
CLCN6-203ENST00000376490 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
CLCN6-203ENST00000376490 LACTBP83111 547 aaPredicted RBP17.17■□□□□ 0.34
CLCN6-203ENST00000376490 GABPAQ06546 454 aa17.17■□□□□ 0.34
CLCN6-203ENST00000376490 SH3D19Q5HYK7 790 aa17.17■□□□□ 0.34
CLCN6-203ENST00000376490 B4GALNT3Q6L9W6 998 aa17.17■□□□□ 0.34
CLCN6-203ENST00000376490 PROCA1Q8NCQ7 364 aaPredicted RBP17.17■□□□□ 0.34
CLCN6-203ENST00000376490 OSBP2Q969R2 916 aa17.17■□□□□ 0.34
CLCN6-203ENST00000376490 STRBPQ96SI9 672 aaKnown RBP17.17■□□□□ 0.34
CLCN6-203ENST00000376490 PARK7Q99497 189 aaKnown RBP17.17■□□□□ 0.34
CLCN6-203ENST00000376490 SLC45A1Q9Y2W3 748 aa17.17■□□□□ 0.34
CLCN6-203ENST00000376490 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 USP17L12C9JPN9 530 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 USP17L21D6R901 530 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 CTGFP29279 349 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 MTMR2Q13614 643 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 KIF22Q14807 665 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 ARHGEF6Q15052 776 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 SMC5Q8IY18 1101 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 APPBP2Q92624 585 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 DYNLL2Q96FJ2 89 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 STAP2Q9UGK3 403 aa17.16■□□□□ 0.34
CLCN6-203ENST00000376490 C19orf81C9J6K1 198 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 USP17L10C9JJH3 530 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 ZFYP08048 801 aaPredicted RBP17.15■□□□□ 0.34
CLCN6-203ENST00000376490 BCRP11274 1271 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 PDE1AP54750 535 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 RAB3GAP1Q15042 981 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 C12orf60Q5U649 245 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 SLC44A5Q8NCS7 719 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 CABP5Q9NP86 173 aa17.15■□□□□ 0.34
CLCN6-203ENST00000376490 M0R2C6 588 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 GUCY1A2P33402 732 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 PSMC4P43686 418 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 CTR9Q6PD62 1173 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 DDRGK1Q96HY6 314 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
CLCN6-203ENST00000376490 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 TMOD4Q9NZQ9 345 aa17.14■□□□□ 0.33
CLCN6-203ENST00000376490 GSG1L2A8MUP6 293 aa17.13■□□□□ 0.33
CLCN6-203ENST00000376490 SOX10P56693 466 aa17.13■□□□□ 0.33
CLCN6-203ENST00000376490 SEPT2Q15019 361 aa17.13■□□□□ 0.33
CLCN6-203ENST00000376490 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
CLCN6-203ENST00000376490 TRIM47Q96LD4 638 aa17.13■□□□□ 0.33
CLCN6-203ENST00000376490 ASCC2Q9H1I8 757 aaPredicted RBP17.13■□□□□ 0.33
CLCN6-203ENST00000376490 MPHOSPH10O00566 681 aaKnown RBP17.12■□□□□ 0.33
CLCN6-203ENST00000376490 GPAA1O43292 621 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
CLCN6-203ENST00000376490 OSBPP22059 807 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 CDK8P49336 464 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 RGS19P49795 217 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 PABPC4Q13310 644 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLCN6-203ENST00000376490 ZYXQ15942 572 aaKnown RBP17.12■□□□□ 0.33
CLCN6-203ENST00000376490 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
CLCN6-203ENST00000376490 ANKRD13CQ8N6S4 541 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 ACER1Q8TDN7 264 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 SWAP70Q9UH65 585 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 PTCH2Q9Y6C5 1203 aa17.12■□□□□ 0.33
CLCN6-203ENST00000376490 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
CLCN6-203ENST00000376490 NUCB1Q02818 461 aa17.11■□□□□ 0.33
CLCN6-203ENST00000376490 ZMYM1Q5SVZ6 1142 aa17.11■□□□□ 0.33
CLCN6-203ENST00000376490 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
CLCN6-203ENST00000376490 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
CLCN6-203ENST00000376490 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
CLCN6-203ENST00000376490 P2RX7Q99572 595 aaKnown RBP17.11■□□□□ 0.33
CLCN6-203ENST00000376490 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms