RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RESTQ13127 1097 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
PDPN-202ENST00000376057 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 RTN1Q16799 776 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 MCTP1Q6DN14 999 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 RCSD1Q6JBY9 416 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 CDC37L1Q7L3B6 337 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 LARGE2Q8N3Y3 721 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 MXD3Q9BW11 206 aa12.97□□□□□ -0.33
PDPN-202ENST00000376057 NIM1KQ8IY84 436 aa12.96□□□□□ -0.33
PDPN-202ENST00000376057 ZNF444Q8N0Y2 327 aaPredicted RBP12.96□□□□□ -0.33
PDPN-202ENST00000376057 FBXO18Q8NFZ0 1043 aa12.96□□□□□ -0.33
PDPN-202ENST00000376057 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.33
PDPN-202ENST00000376057 MKNK2Q9HBH9 465 aa12.96□□□□□ -0.33
PDPN-202ENST00000376057 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
PDPN-202ENST00000376057 MYH8P13535 1937 aa12.96□□□□□ -0.33
PDPN-202ENST00000376057 TSPY2A6NKD2 308 aa12.96□□□□□ -0.34
PDPN-202ENST00000376057 RNF26Q9BY78 433 aaPredicted RBP12.96□□□□□ -0.34
PDPN-202ENST00000376057 IL17RBQ9NRM6 502 aa12.96□□□□□ -0.34
PDPN-202ENST00000376057 ORC3Q9UBD5 711 aaPredicted RBP12.96□□□□□ -0.34
PDPN-202ENST00000376057 HDAC9Q9UKV0 1011 aa12.96□□□□□ -0.34
PDPN-202ENST00000376057 H3BQV1 296 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 MBD3O95983 291 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 RPS12P25398 132 aaKnown RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 SMARCA1P28370 1054 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 ADD1P35611 737 aaKnown RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 TFAP4Q01664 338 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 IFFO2Q5TF58 517 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 CRACR2BQ8N4Y2 399 aaPredicted RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 ZBED3Q96IU2 234 aaPredicted RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 IGKV6D-41A0A0C4DH26 115 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 SCNN1DP51172 638 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 FUT2Q10981 343 aa12.95□□□□□ -0.34
PDPN-202ENST00000376057 ZNF277Q9NRM2 450 aaPredicted RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
PDPN-202ENST00000376057 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 PRPF3O43395 683 aaKnown RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 EVX2Q03828 476 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 TNIP1Q15025 636 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 BRAPQ7Z569 592 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 KIAA0825Q8IV33 1275 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 DDX11Q96FC9 970 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 DYNLL2Q96FJ2 89 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 CCDC17Q96LX7 622 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 ZKSCAN3Q9BRR0 538 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 SCAND2PQ9GZW5 306 aaPredicted RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 NAP1L2Q9ULW6 460 aaPredicted RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 F8W031 263 aaPredicted RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 PSMD14O00487 310 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 PRDM1O75626 825 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 DEXIO95424 95 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 HLA-DOAP06340 250 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 SAP30BPQ9UHR5 308 aaKnown RBP12.94□□□□□ -0.34
PDPN-202ENST00000376057 SERPINB13Q9UIV8 391 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 NFKBIEO00221 500 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 TSPY3P0CV98 308 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 TSPY8P0CW00 308 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 KIF5BP33176 963 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 KRT85P78386 507 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 CFAP100Q494V2 611 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 C8orf76Q96K31 380 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 FAM198AQ9UFP1 575 aa12.94□□□□□ -0.34
PDPN-202ENST00000376057 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 GNAQP50148 359 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 PI4KBQ9UBF8 816 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 ZNF280AP59817 542 aaPredicted RBP12.93□□□□□ -0.34
PDPN-202ENST00000376057 GRM4Q14833 912 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 TATDN1Q6P1N9 297 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 SPON1Q9HCB6 807 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
PDPN-202ENST00000376057 SYNPO2Q9UMS6 1093 aa12.93□□□□□ -0.34
PDPN-202ENST00000376057 TCHHQ07283 1943 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 PRPF40AO75400 957 aaKnown RBP12.92□□□□□ -0.34
PDPN-202ENST00000376057 KAT14Q9H8E8 782 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 FZD9O00144 591 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 U2AF2P26368 475 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDPN-202ENST00000376057 UBE2HP62256 183 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 USP48Q86UV5 1035 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 JDP2Q8WYK2 163 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 MYH6P13533 1939 aa12.92□□□□□ -0.34
PDPN-202ENST00000376057 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
PDPN-202ENST00000376057 SHMT1P34896 483 aa12.91□□□□□ -0.34
PDPN-202ENST00000376057 CXCL9Q07325 125 aa12.91□□□□□ -0.34
PDPN-202ENST00000376057 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms