RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PFKFB1P16118 471 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 ZNF75DP51815 510 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 RCAN1P53805 252 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
MSH5-202ENST00000375740 KIF18AQ8NI77 898 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 ST7Q9NRC1 585 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 IRS2Q9Y4H2 1338 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 GOLGA6L19H0YKK7 550 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 PPP6R2O75170 966 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 DEXIO95424 95 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 MMP1P03956 469 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 EVX2Q03828 476 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 PLA2G4DQ86XP0 818 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
MSH5-202ENST00000375740 MORC2Q9Y6X9 1032 aaPredicted RBP16.1■□□□□ 0.17
MSH5-202ENST00000375740 TNRC6CQ9HCJ0 1690 aaKnown RBP16.09■□□□□ 0.17
MSH5-202ENST00000375740 FGRP09769 529 aa16.09■□□□□ 0.17
MSH5-202ENST00000375740 KIAA1468Q9P260 1216 aa16.09■□□□□ 0.17
MSH5-202ENST00000375740 ANKIB1Q9P2G1 1089 aa16.09■□□□□ 0.17
MSH5-202ENST00000375740 ERICH4A6NGS2 130 aa16.09■□□□□ 0.17
MSH5-202ENST00000375740 TPM3P06753 285 aa16.09■□□□□ 0.17
MSH5-202ENST00000375740 SAFBQ15424 915 aaKnown RBP eCLIP16.09■□□□□ 0.17
MSH5-202ENST00000375740 NOSTRINQ8IVI9 506 aa16.09■□□□□ 0.17
MSH5-202ENST00000375740 CRNKL1Q9BZJ0 848 aaKnown RBP16.09■□□□□ 0.17
MSH5-202ENST00000375740 DUOX1Q9NRD9 1551 aa16.09■□□□□ 0.17
MSH5-202ENST00000375740 MROH7-TTC4A0A0A0MT08 1334 aa16.08■□□□□ 0.17
MSH5-202ENST00000375740 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.16
MSH5-202ENST00000375740 GRAPQ13588 217 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 DIS3L2Q8IYB7 885 aaKnown RBP16.08■□□□□ 0.16
MSH5-202ENST00000375740 SEPT12Q8IYM1 358 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 JMYQ8N9B5 988 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.16
MSH5-202ENST00000375740 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
MSH5-202ENST00000375740 AFF2P51816 1311 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.16
MSH5-202ENST00000375740 SHC4Q6S5L8 630 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 DHX40Q8IX18 779 aaKnown RBP16.08■□□□□ 0.16
MSH5-202ENST00000375740 DRC7Q8IY82 874 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 CNBD1Q8NA66 436 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 ZNF592Q92610 1267 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 CLIC6Q96NY7 704 aa16.08■□□□□ 0.16
MSH5-202ENST00000375740 BECN2A8MW95 431 aa16.07■□□□□ 0.16
MSH5-202ENST00000375740 SLC3A2P08195 630 aaKnown RBP16.07■□□□□ 0.16
MSH5-202ENST00000375740 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
MSH5-202ENST00000375740 KMT5BQ4FZB7 885 aa16.07■□□□□ 0.16
MSH5-202ENST00000375740 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
MSH5-202ENST00000375740 ATP8A2Q9NTI2 1148 aa16.07■□□□□ 0.16
MSH5-202ENST00000375740 CYP2D6P10635 497 aa16.07■□□□□ 0.16
MSH5-202ENST00000375740 TOB1P50616 345 aaPredicted RBP16.07■□□□□ 0.16
MSH5-202ENST00000375740 PPP2R5BQ15173 497 aa16.07■□□□□ 0.16
MSH5-202ENST00000375740 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
MSH5-202ENST00000375740 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
MSH5-202ENST00000375740 LEMD3Q9Y2U8 911 aa16.07■□□□□ 0.16
MSH5-202ENST00000375740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
MSH5-202ENST00000375740 SYKP43405 635 aa16.06■□□□□ 0.16
MSH5-202ENST00000375740 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
MSH5-202ENST00000375740 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
MSH5-202ENST00000375740 CEP57L1Q8IYX8 460 aa16.06■□□□□ 0.16
MSH5-202ENST00000375740 FOXP1Q9H334 677 aaPredicted RBP16.06■□□□□ 0.16
MSH5-202ENST00000375740 HPSEQ9Y251 543 aa16.06■□□□□ 0.16
MSH5-202ENST00000375740 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
MSH5-202ENST00000375740 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.06■□□□□ 0.16
MSH5-202ENST00000375740 DZIP1Q86YF9 867 aaKnown RBP16.06■□□□□ 0.16
MSH5-202ENST00000375740 CCDC112Q8NEF3 446 aa16.06■□□□□ 0.16
MSH5-202ENST00000375740 RNF26Q9BY78 433 aaPredicted RBP16.06■□□□□ 0.16
MSH5-202ENST00000375740 CUTAO60888 179 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 NR5A1Q13285 461 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 FAM47AQ5JRC9 791 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 NAT10Q9H0A0 1025 aaKnown RBP16.05■□□□□ 0.16
MSH5-202ENST00000375740 BIN1O00499 593 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 ORC4O43929 436 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 AKAP17AQ02040 695 aaKnown RBP16.05■□□□□ 0.16
MSH5-202ENST00000375740 SYCP1Q15431 976 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 ZRSR1Q15695 479 aaKnown RBP16.05■□□□□ 0.16
MSH5-202ENST00000375740 RESP18Q5W5W9 173 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 SARM1Q6SZW1 724 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 AOPEPQ8N6M6 819 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 OXER1Q8TDS5 423 aa16.05■□□□□ 0.16
MSH5-202ENST00000375740 CACTINQ8WUQ7 758 aaKnown RBP16.05■□□□□ 0.16
MSH5-202ENST00000375740 USP27XA6NNY8 438 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 NMT2O60551 498 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 PLEKHA8P1O95397 391 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 MYH6P13533 1939 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 FUT2Q10981 343 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 TROAPQ12815 778 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 PKN1Q16512 942 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 DPCR1Q3MIW9 517 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 GPR101Q96P66 508 aaPredicted RBP16.04■□□□□ 0.16
MSH5-202ENST00000375740 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 FAM237AA0A1B0GTK4 181 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 hCG_1642624A0A1W2PR95 340 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 ADRA2BP18089 450 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 CDK11BP21127 795 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms