RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 MYO1BO43795 1136 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 ADD2P35612 726 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 FOSBP53539 338 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 CACNB3P54284 484 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 RALYLQ86SE5 291 aaKnown RBP18.1■□□□□ 0.49
CCDC40-202ENST00000374876 VEZTQ9HBM0 779 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 DACT1Q9NYF0 836 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 MYH2Q9UKX2 1941 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 C1QTNF8P60827 252 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 FSTL1Q12841 308 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 CAMK4Q16566 473 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 NCOA7Q8NI08 942 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 BICD2Q8TD16 824 aa18.1■□□□□ 0.49
CCDC40-202ENST00000374876 DDX19AQ9NUU7 478 aaKnown RBP18.1■□□□□ 0.49
CCDC40-202ENST00000374876 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.1■□□□□ 0.49
CCDC40-202ENST00000374876 ZNF70Q9UC06 446 aaPredicted RBP18.1■□□□□ 0.49
CCDC40-202ENST00000374876 PRC1O43663 620 aa18.09■□□□□ 0.49
CCDC40-202ENST00000374876 EVCP57679 992 aa18.09■□□□□ 0.49
CCDC40-202ENST00000374876 PRAMEF18Q5VWM3 479 aa18.09■□□□□ 0.49
CCDC40-202ENST00000374876 ADGRA1Q86SQ6 560 aa18.09■□□□□ 0.49
CCDC40-202ENST00000374876 MAGEB6Q8N7X4 407 aa18.09■□□□□ 0.49
CCDC40-202ENST00000374876 TNMDQ9H2S6 317 aa18.09■□□□□ 0.49
CCDC40-202ENST00000374876 ADCY5O95622 1261 aa18.08■□□□□ 0.49
CCDC40-202ENST00000374876 MAP3K12Q12852 859 aa18.08■□□□□ 0.49
CCDC40-202ENST00000374876 SULF1Q8IWU6 871 aa18.08■□□□□ 0.49
CCDC40-202ENST00000374876 MROH7-TTC4A0A0A0MT08 1334 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 ZNF500O60304 480 aaPredicted RBP18.08■□□□□ 0.48
CCDC40-202ENST00000374876 KDM4AO75164 1064 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 BTDP43251 543 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 GSTO1P78417 241 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 UBE3CQ15386 1083 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 SPDYE2Q495Y8 402 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 CDC42EP5Q6NZY7 148 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 SLF2Q8IX21 1173 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 MB21D2Q8IYB1 491 aaPredicted RBP18.08■□□□□ 0.48
CCDC40-202ENST00000374876 FAM163AQ96GL9 167 aaPredicted RBP18.08■□□□□ 0.48
CCDC40-202ENST00000374876 PGBD1Q96JS3 809 aa18.08■□□□□ 0.48
CCDC40-202ENST00000374876 GAKO14976 1311 aa18.07■□□□□ 0.48
CCDC40-202ENST00000374876 TCP10L2B9ZVM9 353 aa18.07■□□□□ 0.48
CCDC40-202ENST00000374876 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
CCDC40-202ENST00000374876 LDHCP07864 332 aa18.07■□□□□ 0.48
CCDC40-202ENST00000374876 CYP7A1P22680 504 aa18.07■□□□□ 0.48
CCDC40-202ENST00000374876 GPHNQ9NQX3 736 aaPredicted RBP18.07■□□□□ 0.48
CCDC40-202ENST00000374876 USP40Q9NVE5 1235 aa18.07■□□□□ 0.48
CCDC40-202ENST00000374876 MYH7P12883 1935 aa18.07■□□□□ 0.48
CCDC40-202ENST00000374876 CEBPZQ03701 1054 aaKnown RBP18.06■□□□□ 0.48
CCDC40-202ENST00000374876 TRDNQ13061 729 aa18.06■□□□□ 0.48
CCDC40-202ENST00000374876 CLSTN2Q9H4D0 955 aa18.06■□□□□ 0.48
CCDC40-202ENST00000374876 GPR75-ASB3A0A0A6YYF3 556 aa18.06■□□□□ 0.48
CCDC40-202ENST00000374876 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
CCDC40-202ENST00000374876 PPFIA3O75145 1194 aa18.06■□□□□ 0.48
CCDC40-202ENST00000374876 APPP05067 770 aa18.06■□□□□ 0.48
CCDC40-202ENST00000374876 ZNF396Q96N95 335 aaPredicted RBP18.06■□□□□ 0.48
CCDC40-202ENST00000374876 AATFQ9NY61 560 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC40-202ENST00000374876 PASKQ96RG2 1323 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 PITPNM2Q9BZ72 1349 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 ZNF532Q9HCE3 1301 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 GOLGA8BA8MQT2 603 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 NR1I2O75469 434 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 OFD1O75665 1012 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 PDE6AP16499 860 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 PLCB2Q00722 1185 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 TYRO3Q06418 890 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 ATL3Q6DD88 541 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
CCDC40-202ENST00000374876 CKAP2LQ8IYA6 745 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 MIGA1Q8NAN2 632 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 DEFB129Q9H1M3 183 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 ZNF408Q9H9D4 720 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 WDR19Q8NEZ3 1342 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 ADD1P35611 737 aaKnown RBP18.05■□□□□ 0.48
CCDC40-202ENST00000374876 GUCY1B3Q02153 619 aa18.05■□□□□ 0.48
CCDC40-202ENST00000374876 APOBEC3FQ8IUX4 373 aaKnown RBP18.05■□□□□ 0.48
CCDC40-202ENST00000374876 DOCK2Q92608 1830 aa18.04■□□□□ 0.48
CCDC40-202ENST00000374876 ANTXR2P58335 489 aa18.04■□□□□ 0.48
CCDC40-202ENST00000374876 DYNLL1P63167 89 aaKnown RBP18.04■□□□□ 0.48
CCDC40-202ENST00000374876 NFIAQ12857 509 aa18.04■□□□□ 0.48
CCDC40-202ENST00000374876 FAM200AQ8TCP9 573 aa18.04■□□□□ 0.48
CCDC40-202ENST00000374876 RCOR1Q9UKL0 485 aa18.04■□□□□ 0.48
CCDC40-202ENST00000374876 ECM29Q5VYK3 1845 aa18.04■□□□□ 0.48
CCDC40-202ENST00000374876 CPLX1O14810 134 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 FDPSP14324 419 aaKnown RBP18.03■□□□□ 0.48
CCDC40-202ENST00000374876 RHBDL3P58872 404 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 TCP10Q12799 353 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 RASA3Q14644 834 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 AIDAQ96BJ3 306 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 TCRBV5S4A2TA0A5A2 114 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 CST9Q5W186 159 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 RBM43Q6ZSC3 357 aaKnown RBP18.03■□□□□ 0.48
CCDC40-202ENST00000374876 CDCA5Q96FF9 252 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 TMOD2Q9NZR1 351 aa18.03■□□□□ 0.48
CCDC40-202ENST00000374876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC40-202ENST00000374876 CELF2O95319 508 aaKnown RBP18.02■□□□□ 0.48
CCDC40-202ENST00000374876 SASS6Q6UVJ0 657 aa18.02■□□□□ 0.48
CCDC40-202ENST00000374876 CDAN1Q8IWY9 1227 aa18.02■□□□□ 0.48
CCDC40-202ENST00000374876 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
CCDC40-202ENST00000374876 USP28Q96RU2 1077 aa18.02■□□□□ 0.48
CCDC40-202ENST00000374876 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms