RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TBC1D12O60347 775 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 FGD1P98174 961 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 MAP3K10Q02779 954 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 RASA3Q14644 834 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 TATDN1Q6P1N9 297 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 USP50Q70EL3 339 aaPredicted RBP20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 IQCA1Q86XH1 822 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 ZSCAN10Q96SZ4 725 aaPredicted RBP20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 TMEM39BQ9GZU3 492 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 GPHNQ9NQX3 736 aaPredicted RBP20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 GGA3Q9NZ52 723 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 TNKSO95271 1327 aa20.26■□□□□ 0.83
HLA-DMA-201ENST00000374843 TSPY2A6NKD2 308 aa20.25■□□□□ 0.83
HLA-DMA-201ENST00000374843 IFIT3O14879 490 aaKnown RBP20.25■□□□□ 0.83
HLA-DMA-201ENST00000374843 CCDC178Q5BJE1 867 aa20.25■□□□□ 0.83
HLA-DMA-201ENST00000374843 ANGEL2Q5VTE6 544 aaKnown RBP20.25■□□□□ 0.83
HLA-DMA-201ENST00000374843 ZNF444Q8N0Y2 327 aaPredicted RBP20.25■□□□□ 0.83
HLA-DMA-201ENST00000374843 CRACR2BQ8N4Y2 399 aaPredicted RBP20.25■□□□□ 0.83
HLA-DMA-201ENST00000374843 NEDD1Q8NHV4 660 aa20.25■□□□□ 0.83
HLA-DMA-201ENST00000374843 LARGE1O95461 756 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 EPHX2P34913 555 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 NOVP48745 357 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 RCAN1P53805 252 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 TFAP4Q01664 338 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 ME3Q16798 604 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 FAM47AQ5JRC9 791 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 NOL8Q76FK4 1167 aaKnown RBP20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 ENAHQ8N8S7 591 aaPredicted RBP20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 ANKS1AQ92625 1134 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 ZNF274Q96GC6 653 aaPredicted RBP20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 CCDC17Q96LX7 622 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
HLA-DMA-201ENST00000374843 IGKV6D-41A0A0C4DH26 115 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 DCAF8L1A6NGE4 600 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 TSPY3P0CV98 308 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 TSPY8P0CW00 308 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 APOBRQ0VD83 1088 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 ST3GAL1Q11201 340 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 WTAPQ15007 396 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 TMTC2Q8N394 836 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 ZC3H15Q8WU90 426 aaKnown RBP20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 TAF1DQ9H5J8 278 aaPredicted RBP20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 IL17RBQ9NRM6 502 aa20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 DAXXQ9UER7 740 aaPredicted RBP20.23■□□□□ 0.83
HLA-DMA-201ENST00000374843 ERICH2A1L162 156 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 POTECB2RU33 542 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 PFKFB2O60825 505 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 RCSD1Q6JBY9 416 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 GTF3C6Q969F1 213 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 INTS4Q96HW7 963 aaKnown RBP20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 ZKSCAN3Q9BRR0 538 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 LARP6Q9BRS8 491 aaKnown RBP20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 TRIM34Q9BYJ4 488 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 SENP2Q9HC62 589 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 BRPF3Q9ULD4 1205 aa20.22■□□□□ 0.83
HLA-DMA-201ENST00000374843 KLF18A0A0U1RQI7 1052 aa20.21■□□□□ 0.83
HLA-DMA-201ENST00000374843 AKR1B1P15121 316 aa20.21■□□□□ 0.83
HLA-DMA-201ENST00000374843 SLC4A3P48751 1232 aa20.21■□□□□ 0.83
HLA-DMA-201ENST00000374843 APOA5Q6Q788 366 aa20.21■□□□□ 0.83
HLA-DMA-201ENST00000374843 DGKHQ86XP1 1220 aa20.21■□□□□ 0.83
HLA-DMA-201ENST00000374843 SSC5DA1L4H1 1573 aa20.21■□□□□ 0.83
HLA-DMA-201ENST00000374843 FAM196BA6NMK8 535 aa20.2■□□□□ 0.82
HLA-DMA-201ENST00000374843 GOLGA8BA8MQT2 603 aa20.2■□□□□ 0.82
HLA-DMA-201ENST00000374843 NMT2O60551 498 aa20.2■□□□□ 0.82
HLA-DMA-201ENST00000374843 SLURP2P0DP57 97 aa20.2■□□□□ 0.82
HLA-DMA-201ENST00000374843 PDIA3P30101 505 aaKnown RBP20.2■□□□□ 0.82
HLA-DMA-201ENST00000374843 HOOK2Q96ED9 719 aa20.2■□□□□ 0.82
HLA-DMA-201ENST00000374843 HPS5Q9UPZ3 1129 aa20.2■□□□□ 0.82
HLA-DMA-201ENST00000374843 CERKLQ49MI3 558 aaPredicted RBP20.19■□□□□ 0.82
HLA-DMA-201ENST00000374843 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
HLA-DMA-201ENST00000374843 IFIT1BQ5T764 474 aaKnown RBP20.19■□□□□ 0.82
HLA-DMA-201ENST00000374843 PNMA8AQ86V59 439 aaPredicted RBP20.19■□□□□ 0.82
HLA-DMA-201ENST00000374843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.19■□□□□ 0.82
HLA-DMA-201ENST00000374843 CCDC69A6NI79 296 aa20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 DDAH1O94760 285 aa20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 TMEM179Q6ZVK1 233 aa20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 ZNF654Q8IZM8 581 aa20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 CEP95Q96GE4 821 aa20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 SLKQ9H2G2 1235 aaPredicted RBP20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 SLC12A7Q9Y666 1083 aa20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 PAPPA2Q9BXP8 1791 aa20.18■□□□□ 0.82
HLA-DMA-201ENST00000374843 ZBTB43O43298 467 aa20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 SCRN1Q12765 414 aa20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 RRP1BQ14684 758 aaKnown RBP20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 NFXL1Q6ZNB6 911 aa20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 DCPSQ96C86 337 aaKnown RBP20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 CHMP4CQ96CF2 233 aa20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 MTMR4Q9NYA4 1195 aa20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 SCAF8Q9UPN6 1271 aaKnown RBP20.17■□□□□ 0.82
HLA-DMA-201ENST00000374843 DDIT3P35638 169 aa20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 ABCB5Q2M3G0 1257 aa20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 NBPF12Q5TAG4 269 aaPredicted RBP20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 DCAF15Q66K64 600 aa20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 CCDC83Q8IWF9 413 aa20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 SULF1Q8IWU6 871 aa20.16■□□□□ 0.82
HLA-DMA-201ENST00000374843 NECAB1Q8N987 351 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms