RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 NEXMIFQ5QGS0 1516 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 CCDC186Q7Z3E2 898 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 USP32Q8NFA0 1604 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 BICD2Q8TD16 824 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 C8orf48Q96LL4 319 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
USP48-203ENST00000374732 JCADQ9P266 1359 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 F8W031 263 aaPredicted RBP9.02□□□□□ -0.96
USP48-203ENST00000374732 MUSKO15146 869 aa9.02□□□□□ -0.96
USP48-203ENST00000374732 BTF3P20290 206 aaKnown RBP9.02□□□□□ -0.96
USP48-203ENST00000374732 RTL10Q7L3V2 364 aa9.02□□□□□ -0.96
USP48-203ENST00000374732 ARMC2Q8NEN0 867 aa9.02□□□□□ -0.96
USP48-203ENST00000374732 TNIP2Q8NFZ5 429 aa9.02□□□□□ -0.96
USP48-203ENST00000374732 FOXN3O00409 490 aaPredicted RBP9.02□□□□□ -0.97
USP48-203ENST00000374732 BAIAP3O94812 1187 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 NASPP49321 788 aaPredicted RBP9.02□□□□□ -0.97
USP48-203ENST00000374732 TTC39AQ5SRH9 613 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 DAAM2Q86T65 1068 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 FERMT3Q86UX7 667 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 CEP57L1Q8IYX8 460 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 GPR101Q96P66 508 aaPredicted RBP9.02□□□□□ -0.97
USP48-203ENST00000374732 HAUS7Q99871 368 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 QRICH2Q9H0J4 1663 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 BTBD11A6QL63 1104 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 UBA7P41226 1012 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 COPAP53621 1224 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 KIAA0753Q2KHM9 967 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 WASHC4Q2M389 1173 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 MAP7D1Q3KQU3 841 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 TEX19Q8NA77 164 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 PCSK1NQ9UHG2 260 aa9.02□□□□□ -0.97
USP48-203ENST00000374732 TBKBP1A7MCY6 615 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 BIN1O00499 593 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 KATNA1O75449 491 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 VIL1P09327 827 aaKnown RBP9.01□□□□□ -0.97
USP48-203ENST00000374732 PECAM1P16284 738 aaPredicted RBP9.01□□□□□ -0.97
USP48-203ENST00000374732 LBRQ14739 615 aaKnown RBP9.01□□□□□ -0.97
USP48-203ENST00000374732 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
USP48-203ENST00000374732 GGT6Q6P531 493 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 TINF2Q9BSI4 451 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 TSPY2A6NKD2 308 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 C2orf81A6NN90 581 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 TSPY3P0CV98 308 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 TSPY8P0CW00 308 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 NCAM1P13591 858 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 CCNCP24863 283 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 TSPY1Q01534 308 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 RRP12Q5JTH9 1297 aaKnown RBP9.01□□□□□ -0.97
USP48-203ENST00000374732 SEPT14Q6ZU15 432 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 BTN2A1Q7KYR7 527 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 HDAC7Q8WUI4 952 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.01□□□□□ -0.979e-9■■□□□ 14
USP48-203ENST00000374732 TAGLN3Q9UI15 199 aa9.01□□□□□ -0.97
USP48-203ENST00000374732 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.01□□□□□ -0.97
USP48-203ENST00000374732 ORC4O43929 436 aa9□□□□□ -0.97
USP48-203ENST00000374732 TBCAO75347 108 aaKnown RBP9□□□□□ -0.97
USP48-203ENST00000374732 BAG4O95429 457 aaKnown RBP9□□□□□ -0.97
USP48-203ENST00000374732 IL33O95760 270 aa9□□□□□ -0.97
USP48-203ENST00000374732 RASA1P20936 1047 aa9□□□□□ -0.97
USP48-203ENST00000374732 MARSP56192 900 aaKnown RBP9□□□□□ -0.97
USP48-203ENST00000374732 TMEM62Q0P6H9 643 aa9□□□□□ -0.97
USP48-203ENST00000374732 BNIP1Q12981 228 aa9□□□□□ -0.97
USP48-203ENST00000374732 PKN2Q16513 984 aaKnown RBP9□□□□□ -0.97
USP48-203ENST00000374732 ZNF746Q6NUN9 644 aaPredicted RBP9□□□□□ -0.97
USP48-203ENST00000374732 CYP26C1Q6V0L0 522 aa9□□□□□ -0.97
USP48-203ENST00000374732 PACS2Q86VP3 889 aa9□□□□□ -0.97
USP48-203ENST00000374732 GOLGA5Q8TBA6 731 aa9□□□□□ -0.97
USP48-203ENST00000374732 ARNT2Q9HBZ2 717 aa9□□□□□ -0.97
USP48-203ENST00000374732 PTCH1Q13635 1447 aa9□□□□□ -0.97
USP48-203ENST00000374732 PRMT3O60678 531 aa9□□□□□ -0.97
USP48-203ENST00000374732 MYL3P08590 195 aa9□□□□□ -0.97
USP48-203ENST00000374732 HSPA4P34932 840 aa9□□□□□ -0.97
USP48-203ENST00000374732 SKIV2L2P42285 1042 aaKnown RBP9□□□□□ -0.97
USP48-203ENST00000374732 HDAC4P56524 1084 aa9□□□□□ -0.97
USP48-203ENST00000374732 NLRP12P59046 1061 aa9□□□□□ -0.97
USP48-203ENST00000374732 SYT10Q6XYQ8 523 aa9□□□□□ -0.97
USP48-203ENST00000374732 TEX11Q8IYF3 940 aa9□□□□□ -0.97
USP48-203ENST00000374732 NEK1Q96PY6 1258 aa9□□□□□ -0.97
USP48-203ENST00000374732 GDPD2Q9HCC8 539 aa9□□□□□ -0.97
USP48-203ENST00000374732 PSD3Q9NYI0 1048 aa9□□□□□ -0.97
USP48-203ENST00000374732 DAAM1Q9Y4D1 1078 aa9□□□□□ -0.97
USP48-203ENST00000374732 LRP5O75197 1615 aa9□□□□□ -0.97
USP48-203ENST00000374732 BHMG1C9JSJ3 638 aaPredicted RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 PCNAP12004 261 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 IDEP14735 1019 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 CENPAP49450 140 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 ICA1Q05084 483 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 LDLRAD1Q5T700 205 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 ERAP2Q6P179 960 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 CCDC191Q8NCU4 936 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 PARD3BQ8TEW8 1205 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 JPH3Q8WXH2 748 aaPredicted RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 PRKAB1Q9Y478 270 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 MARF1Q9Y4F3 1742 aaKnown RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 ARHGEF28Q8N1W1 1705 aaKnown RBP8.99□□□□□ -0.97
USP48-203ENST00000374732 PIP5K1CO60331 668 aa8.99□□□□□ -0.97
USP48-203ENST00000374732 PAHP00439 452 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms