RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CCDC17Q96LX7 622 aa17.85■□□□□ 0.45
HSPG2-201ENST00000374673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.85■□□□□ 0.45
HSPG2-201ENST00000374673 GDF11O95390 407 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 ASNSP08243 561 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 FGRP09769 529 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 PTPRAP18433 802 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 HAND2P61296 217 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 PPATQ06203 517 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 CYP4F22Q6NT55 531 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
HSPG2-201ENST00000374673 ERO1BQ86YB8 467 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 WNK4Q96J92 1243 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 CAPNS2Q96L46 248 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 PICK1Q9NRD5 415 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 ZBTB21Q9ULJ3 1066 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 RBM8AQ9Y5S9 174 aaKnown RBP17.84■□□□□ 0.45
HSPG2-201ENST00000374673 PTPRFP10586 1907 aa17.84■□□□□ 0.45
HSPG2-201ENST00000374673 ZBTB48P10074 688 aaPredicted RBP17.83■□□□□ 0.44
HSPG2-201ENST00000374673 PCP11498 1178 aaKnown RBP17.83■□□□□ 0.44
HSPG2-201ENST00000374673 RASA1P20936 1047 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 JAG1P78504 1218 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 ABCB5Q2M3G0 1257 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 SPRYD7Q5W111 196 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 STK11IPQ8N1F8 1099 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 STAG1Q8WVM7 1258 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 OPTNQ96CV9 577 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 TBC1D2Q9BYX2 928 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 NBPF3Q9H094 633 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 MKNK2Q9HBH9 465 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 TACC3Q9Y6A5 838 aa17.83■□□□□ 0.44
HSPG2-201ENST00000374673 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
HSPG2-201ENST00000374673 ORC4O43929 436 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 REC8O95072 547 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 GH2P01242 217 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 GJA5P36382 358 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 PPIL2Q13356 520 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 SHROOM1Q2M3G4 852 aaPredicted RBP17.82■□□□□ 0.44
HSPG2-201ENST00000374673 AKNAD1Q5T1N1 836 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 TBC1D10CQ8IV04 446 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 RNF41Q9H4P4 317 aaPredicted RBP17.82■□□□□ 0.44
HSPG2-201ENST00000374673 CABP5Q9NP86 173 aa17.82■□□□□ 0.44
HSPG2-201ENST00000374673 USP17L5A8MUK1 530 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 EPB41L2O43491 1005 aaKnown RBP17.81■□□□□ 0.44
HSPG2-201ENST00000374673 PRDM1O75626 825 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 CYP21A2P08686 494 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 AKR1B1P15121 316 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 VEGFBP49765 207 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 NOGQ13253 232 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 TMEM179Q6ZVK1 233 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 ZNF444Q8N0Y2 327 aaPredicted RBP17.81■□□□□ 0.44
HSPG2-201ENST00000374673 OTUD5Q96G74 571 aa17.81■□□□□ 0.44
HSPG2-201ENST00000374673 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.81■□□□□ 0.44
HSPG2-201ENST00000374673 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.81■□□□□ 0.44
HSPG2-201ENST00000374673 PLIN4Q96Q06 1357 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 GUCY1A2P33402 732 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 NT5C2P49902 561 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 NECTIN1Q15223 517 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 MFSD6Q6ZSS7 791 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 AS3MTQ9HBK9 375 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 INCENPQ9NQS7 918 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 ZHX2Q9Y6X8 837 aa17.8■□□□□ 0.44
HSPG2-201ENST00000374673 MPHOSPH10O00566 681 aaKnown RBP17.79■□□□□ 0.44
HSPG2-201ENST00000374673 IRF6O14896 467 aa17.79■□□□□ 0.44
HSPG2-201ENST00000374673 EIF5BO60841 1220 aaKnown RBP17.79■□□□□ 0.44
HSPG2-201ENST00000374673 GRM1Q13255 1194 aa17.79■□□□□ 0.44
HSPG2-201ENST00000374673 SEPT2Q15019 361 aa17.79■□□□□ 0.44
HSPG2-201ENST00000374673 CCDC84Q86UT8 332 aaPredicted RBP17.79■□□□□ 0.44
HSPG2-201ENST00000374673 AFG3L2Q9Y4W6 797 aa17.79■□□□□ 0.44
HSPG2-201ENST00000374673 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
HSPG2-201ENST00000374673 NEDD4P46934 1319 aa17.78■□□□□ 0.44
HSPG2-201ENST00000374673 RAB3GAP1Q15042 981 aa17.78■□□□□ 0.44
HSPG2-201ENST00000374673 C8orf34Q49A92 452 aa17.78■□□□□ 0.44
HSPG2-201ENST00000374673 CREB3L3Q68CJ9 461 aa17.78■□□□□ 0.44
HSPG2-201ENST00000374673 NEDD1Q8NHV4 660 aa17.78■□□□□ 0.44
HSPG2-201ENST00000374673 WDR18Q9BV38 432 aa17.78■□□□□ 0.44
HSPG2-201ENST00000374673 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.78■□□□□ 0.44
HSPG2-201ENST00000374673 MYH4Q9Y623 1939 aa17.78■□□□□ 0.44
HSPG2-201ENST00000374673 IGKV6D-41A0A0C4DH26 115 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 MANSC4A6NHS7 340 aaPredicted RBP17.77■□□□□ 0.44
HSPG2-201ENST00000374673 TSPY2A6NKD2 308 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 CXCL11O14625 94 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 SLC27A2O14975 620 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 AOC2O75106 756 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 MAP2K2P36507 400 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 GTF2A2P52657 109 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 TFAP4Q01664 338 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 MKRN3Q13064 507 aaKnown RBP17.77■□□□□ 0.44
HSPG2-201ENST00000374673 RNF20Q5VTR2 975 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 ZNF280CQ8ND82 737 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 CNNM2Q9H8M5 875 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 KANSL2Q9H9L4 492 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 TOMM22Q9NS69 142 aa17.77■□□□□ 0.44
HSPG2-201ENST00000374673 RANBP6O60518 1105 aaKnown RBP17.76■□□□□ 0.43
HSPG2-201ENST00000374673 HSPA4P34932 840 aa17.76■□□□□ 0.43
HSPG2-201ENST00000374673 KIF23Q02241 960 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms