RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 A0A0G2JS52 829 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 GSG1L2A8MUP6 293 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 ERCC5P28715 1186 aaPredicted RBP20.53■□□□□ 0.88
PHF1-201ENST00000374512 SIK1P57059 783 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 WTAPQ15007 396 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 BARGINQ6ZT62 677 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 MNS1Q8NEH6 495 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 BAG1Q99933 345 aaPredicted RBP20.53■□□□□ 0.88
PHF1-201ENST00000374512 MYL10Q9BUA6 226 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 ZNF446Q9NWS9 450 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 PPP2R2CQ9Y2T4 447 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 CCDC152Q4G0S7 254 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 ARHGAP29Q52LW3 1261 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 CRACR2BQ8N4Y2 399 aaPredicted RBP20.53■□□□□ 0.88
PHF1-201ENST00000374512 INTS13Q9NVM9 706 aa20.53■□□□□ 0.88
PHF1-201ENST00000374512 ATP8B1O43520 1251 aa20.52■□□□□ 0.88
PHF1-201ENST00000374512 IGHMBP2P38935 993 aaKnown RBP20.52■□□□□ 0.88
PHF1-201ENST00000374512 CTDSPL2Q05D32 466 aa20.52■□□□□ 0.88
PHF1-201ENST00000374512 PDE4BQ07343 736 aa20.52■□□□□ 0.88
PHF1-201ENST00000374512 SPATA20Q8TB22 786 aa20.52■□□□□ 0.88
PHF1-201ENST00000374512 SEC31BQ9NQW1 1179 aa20.52■□□□□ 0.88
PHF1-201ENST00000374512 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.87
PHF1-201ENST00000374512 TMEM232C9JQI7 657 aa20.51■□□□□ 0.87
PHF1-201ENST00000374512 CDK11BP21127 795 aaKnown RBP20.51■□□□□ 0.87
PHF1-201ENST00000374512 ARMT1Q9H993 441 aa20.51■□□□□ 0.87
PHF1-201ENST00000374512 NFE2L3Q9Y4A8 694 aa20.51■□□□□ 0.87
PHF1-201ENST00000374512 POLR2DO15514 142 aaKnown RBP20.51■□□□□ 0.87
PHF1-201ENST00000374512 CLCN6P51797 869 aa20.51■□□□□ 0.87
PHF1-201ENST00000374512 PARP3Q9Y6F1 533 aa20.51■□□□□ 0.87
PHF1-201ENST00000374512 RTL9Q8NET4 1388 aa20.51■□□□□ 0.87
PHF1-201ENST00000374512 VWA3AA6NCI4 1184 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 SNAP23O00161 211 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 TADA3O75528 432 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 CAMTA2O94983 1202 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 LAMB2P55268 1798 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 BCORQ6W2J9 1755 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 NUTM2BA6NNL0 878 aaPredicted RBP20.5■□□□□ 0.87
PHF1-201ENST00000374512 NUTM2EB1AL46 878 aaPredicted RBP20.5■□□□□ 0.87
PHF1-201ENST00000374512 URI1O94763 535 aaPredicted RBP20.5■□□□□ 0.87
PHF1-201ENST00000374512 TDO2P48775 406 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 ITPK1Q13572 414 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
PHF1-201ENST00000374512 INCENPQ9NQS7 918 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 SERTAD1Q9UHV2 236 aa20.5■□□□□ 0.87
PHF1-201ENST00000374512 XBP1P17861 261 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 GUCY1A2P33402 732 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 PLCD1P51178 756 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 TC2NQ8N9U0 490 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 FANCBQ8NB91 859 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 RNF26Q9BY78 433 aaPredicted RBP20.49■□□□□ 0.87
PHF1-201ENST00000374512 FHOD1Q9Y613 1164 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 FOXN1O15353 648 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 ACTN4O43707 911 aaKnown RBP20.49■□□□□ 0.87
PHF1-201ENST00000374512 BMP15O95972 392 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 TMCO3Q6UWJ1 677 aa20.49■□□□□ 0.87
PHF1-201ENST00000374512 SMARCC1Q92922 1105 aaPredicted RBP20.49■□□□□ 0.87
PHF1-201ENST00000374512 NPHP1O15259 732 aa20.48■□□□□ 0.87
PHF1-201ENST00000374512 ZRANB2O95218 330 aaKnown RBP eCLIP20.48■□□□□ 0.87
PHF1-201ENST00000374512 CASQ1P31415 396 aa20.48■□□□□ 0.87
PHF1-201ENST00000374512 BCAMP50895 628 aa20.48■□□□□ 0.87
PHF1-201ENST00000374512 MAP3K9P80192 1104 aa20.48■□□□□ 0.87
PHF1-201ENST00000374512 AATFQ9NY61 560 aaKnown RBP eCLIP20.48■□□□□ 0.87
PHF1-201ENST00000374512 KCNJ14Q9UNX9 436 aa20.48■□□□□ 0.87
PHF1-201ENST00000374512 TACC3Q9Y6A5 838 aa20.48■□□□□ 0.87
PHF1-201ENST00000374512 SLC4A4Q9Y6R1 1079 aa20.48■□□□□ 0.87
PHF1-201ENST00000374512 NTSR2O95665 410 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 NR1I3Q14994 352 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 LCORLQ8N3X6 602 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 LRRN4CLQ8ND94 238 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 PANX2Q96RD6 677 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 NAA15Q9BXJ9 866 aaKnown RBP20.47■□□□□ 0.87
PHF1-201ENST00000374512 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 NIP7Q9Y221 180 aaKnown RBP eCLIP20.47■□□□□ 0.87
PHF1-201ENST00000374512 A0A1B0GTH6 734 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 UBE2Q2LH0YL09 131 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 FMR1Q06787 632 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■□□□□ 10.3
PHF1-201ENST00000374512 ZNF654Q8IZM8 581 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 ANAPC4Q9UJX5 808 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 PCDHB6Q9Y5E3 794 aa20.47■□□□□ 0.87
PHF1-201ENST00000374512 PRKAB2O43741 272 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 PNMA6AP0CW24 399 aaPredicted RBP20.46■□□□□ 0.87
PHF1-201ENST00000374512 SPECC1Q5M775 1068 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 GPR161Q8N6U8 529 aaKnown RBP20.46■□□□□ 0.87
PHF1-201ENST00000374512 PDILTQ8N807 584 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 UBAC1Q9BSL1 405 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 LRP2BPQ9P2M1 347 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 SEMA3EO15041 775 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 CHRNDQ07001 517 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 TAOK2Q9UL54 1235 aa20.46■□□□□ 0.87
PHF1-201ENST00000374512 COL5A3P25940 1745 aaPredicted RBP20.45■□□□□ 0.86
PHF1-201ENST00000374512 TRIM75PA6NK02 468 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 PRR29P0C7W0 189 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 GNG11P61952 73 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
PHF1-201ENST00000374512 GRIN1Q05586 938 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 RRP12Q5JTH9 1297 aaKnown RBP20.45■□□□□ 0.86
PHF1-201ENST00000374512 ESR2Q92731 530 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 FERMT2Q96AC1 680 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 CTAGE1Q96RT6 745 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms